Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02011 and MPMX26_02012 are separated by 45 nucleotides MPMX26_02012 and MPMX26_02013 are separated by 310 nucleotides MPMX26_02013 and MPMX26_02014 are separated by 152 nucleotides MPMX26_02014 and MPMX26_02015 are separated by 182 nucleotides
MPMX26_02011: MPMX26_02011 - tRNA 5-hydroxyuridine methyltransferase, at 2,076,250 to 2,076,834
_02011
MPMX26_02012: MPMX26_02012 - hypothetical protein, at 2,076,880 to 2,077,095
_02012
MPMX26_02013: MPMX26_02013 - Alkyl hydroperoxide reductase subunit F, at 2,077,406 to 2,078,971
_02013
MPMX26_02014: MPMX26_02014 - hypothetical protein, at 2,079,124 to 2,079,483
_02014
MPMX26_02015: MPMX26_02015 - hypothetical protein, at 2,079,666 to 2,080,049
_02015
Position (kb)
2077
2078
2079 Strain fitness (log2 ratio)
-1
0
1 at 2076.471 kb on + strand, within MPMX26_02011 at 2076.928 kb on - strand, within MPMX26_02012 at 2076.987 kb on - strand, within MPMX26_02012 at 2077.069 kb on - strand, within MPMX26_02012 at 2077.069 kb on - strand, within MPMX26_02012 at 2077.603 kb on + strand, within MPMX26_02013 at 2077.834 kb on + strand, within MPMX26_02013 at 2077.834 kb on + strand, within MPMX26_02013 at 2077.834 kb on + strand, within MPMX26_02013 at 2078.057 kb on + strand, within MPMX26_02013 at 2078.311 kb on + strand, within MPMX26_02013 at 2078.321 kb on + strand, within MPMX26_02013 at 2078.321 kb on + strand, within MPMX26_02013 at 2078.365 kb on + strand, within MPMX26_02013 at 2078.410 kb on + strand, within MPMX26_02013 at 2078.674 kb on + strand, within MPMX26_02013 at 2078.708 kb on + strand, within MPMX26_02013 at 2078.708 kb on + strand, within MPMX26_02013 at 2079.451 kb on + strand at 2079.704 kb on + strand at 2079.711 kb on + strand, within MPMX26_02015 at 2079.762 kb on + strand, within MPMX26_02015 at 2079.773 kb on + strand, within MPMX26_02015 at 2079.773 kb on + strand, within MPMX26_02015 at 2079.773 kb on + strand, within MPMX26_02015 at 2079.773 kb on + strand, within MPMX26_02015 at 2079.780 kb on + strand, within MPMX26_02015 at 2079.852 kb on + strand, within MPMX26_02015 at 2079.866 kb on + strand, within MPMX26_02015 at 2079.866 kb on + strand, within MPMX26_02015 at 2079.870 kb on + strand, within MPMX26_02015 at 2079.876 kb on + strand, within MPMX26_02015 at 2079.876 kb on + strand, within MPMX26_02015 at 2079.935 kb on + strand, within MPMX26_02015 at 2079.935 kb on + strand, within MPMX26_02015 at 2079.935 kb on + strand, within MPMX26_02015 at 2079.943 kb on + strand, within MPMX26_02015 at 2079.943 kb on + strand, within MPMX26_02015
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,076,471 + MPMX26_02011 0.38 -0.3 2,076,928 - MPMX26_02012 0.22 -0.4 2,076,987 - MPMX26_02012 0.50 -0.4 2,077,069 - MPMX26_02012 0.88 +0.7 2,077,069 - MPMX26_02012 0.88 -1.1 2,077,603 + MPMX26_02013 0.13 -1.6 2,077,834 + MPMX26_02013 0.27 +0.5 2,077,834 + MPMX26_02013 0.27 -0.0 2,077,834 + MPMX26_02013 0.27 +0.9 2,078,057 + MPMX26_02013 0.42 -0.1 2,078,311 + MPMX26_02013 0.58 -0.6 2,078,321 + MPMX26_02013 0.58 +0.9 2,078,321 + MPMX26_02013 0.58 +0.8 2,078,365 + MPMX26_02013 0.61 +0.6 2,078,410 + MPMX26_02013 0.64 -0.7 2,078,674 + MPMX26_02013 0.81 +0.3 2,078,708 + MPMX26_02013 0.83 +0.3 2,078,708 + MPMX26_02013 0.83 -0.0 2,079,451 + +0.7 2,079,704 + -0.2 2,079,711 + MPMX26_02015 0.12 +0.1 2,079,762 + MPMX26_02015 0.25 +1.3 2,079,773 + MPMX26_02015 0.28 +0.6 2,079,773 + MPMX26_02015 0.28 +0.1 2,079,773 + MPMX26_02015 0.28 +0.4 2,079,773 + MPMX26_02015 0.28 +0.0 2,079,780 + MPMX26_02015 0.30 +0.3 2,079,852 + MPMX26_02015 0.48 +0.1 2,079,866 + MPMX26_02015 0.52 -0.4 2,079,866 + MPMX26_02015 0.52 +0.1 2,079,870 + MPMX26_02015 0.53 +0.1 2,079,876 + MPMX26_02015 0.55 +0.1 2,079,876 + MPMX26_02015 0.55 -0.0 2,079,935 + MPMX26_02015 0.70 -0.3 2,079,935 + MPMX26_02015 0.70 -0.3 2,079,935 + MPMX26_02015 0.70 -0.3 2,079,943 + MPMX26_02015 0.72 -0.2 2,079,943 + MPMX26_02015 0.72 -0.1
Or see this region's nucleotide sequence