Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01853

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01852 and MPMX26_01853 are separated by 481 nucleotidesMPMX26_01853 and MPMX26_01854 are separated by 379 nucleotides MPMX26_01852: MPMX26_01852 - DNA-binding transcriptional activator DecR, at 1,889,354 to 1,889,836 _01852 MPMX26_01853: MPMX26_01853 - hypothetical protein, at 1,890,318 to 1,891,082 _01853 MPMX26_01854: MPMX26_01854 - Dibenzothiophene desulfurization enzyme C, at 1,891,462 to 1,892,664 _01854 Position (kb) 1890 1891 1892Strain fitness (log2 ratio) -1 0 1at 1889.371 kb on - strandat 1889.619 kb on - strand, within MPMX26_01852at 1889.621 kb on - strand, within MPMX26_01852at 1889.631 kb on - strand, within MPMX26_01852at 1889.693 kb on - strand, within MPMX26_01852at 1889.737 kb on - strand, within MPMX26_01852at 1889.739 kb on - strand, within MPMX26_01852at 1889.833 kb on - strandat 1889.979 kb on - strandat 1889.979 kb on - strandat 1890.049 kb on - strandat 1890.066 kb on - strandat 1890.087 kb on - strandat 1890.107 kb on - strandat 1890.867 kb on - strand, within MPMX26_01853at 1891.088 kb on - strandat 1891.453 kb on + strandat 1891.859 kb on - strand, within MPMX26_01854

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,889,371 - -0.2
1,889,619 - MPMX26_01852 0.55 -0.4
1,889,621 - MPMX26_01852 0.55 -0.2
1,889,631 - MPMX26_01852 0.57 +0.2
1,889,693 - MPMX26_01852 0.70 -0.0
1,889,737 - MPMX26_01852 0.79 +0.9
1,889,739 - MPMX26_01852 0.80 +0.5
1,889,833 - +0.3
1,889,979 - -0.5
1,889,979 - +0.4
1,890,049 - -1.3
1,890,066 - -0.8
1,890,087 - -0.2
1,890,107 - -0.5
1,890,867 - MPMX26_01853 0.72 +1.0
1,891,088 - +0.6
1,891,453 + -0.3
1,891,859 - MPMX26_01854 0.33 -0.8

Or see this region's nucleotide sequence