Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01771 and MPMX26_01772 are separated by 87 nucleotides MPMX26_01772 and MPMX26_01773 are separated by 92 nucleotides MPMX26_01773 and MPMX26_01774 are separated by 274 nucleotides MPMX26_01774 and MPMX26_01775 are separated by 160 nucleotides
MPMX26_01771: MPMX26_01771 - Ethanolamine ammonia-lyase light chain, at 1,832,485 to 1,833,300
_01771
MPMX26_01772: MPMX26_01772 - hypothetical protein, at 1,833,388 to 1,834,113
_01772
MPMX26_01773: MPMX26_01773 - Protein YceI, at 1,834,206 to 1,834,805
_01773
MPMX26_01774: MPMX26_01774 - hypothetical protein, at 1,835,080 to 1,835,631
_01774
MPMX26_01775: MPMX26_01775 - Transketolase 1, at 1,835,792 to 1,837,780
_01775
Position (kb)
1834
1835 Strain fitness (log2 ratio)
-2
-1
0
1 at 1833.677 kb on - strand, within MPMX26_01772 at 1833.753 kb on + strand, within MPMX26_01772 at 1833.805 kb on + strand, within MPMX26_01772 at 1833.996 kb on + strand, within MPMX26_01772 at 1834.038 kb on + strand, within MPMX26_01772 at 1834.053 kb on + strand at 1834.256 kb on - strand at 1834.337 kb on - strand, within MPMX26_01773 at 1834.370 kb on - strand, within MPMX26_01773 at 1834.638 kb on - strand, within MPMX26_01773 at 1834.713 kb on - strand, within MPMX26_01773 at 1834.754 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 1,833,677 - MPMX26_01772 0.40 +0.6 1,833,753 + MPMX26_01772 0.50 -0.6 1,833,805 + MPMX26_01772 0.57 -0.6 1,833,996 + MPMX26_01772 0.84 -2.7 1,834,038 + MPMX26_01772 0.90 +0.7 1,834,053 + +0.2 1,834,256 - +0.4 1,834,337 - MPMX26_01773 0.22 +1.1 1,834,370 - MPMX26_01773 0.27 -0.5 1,834,638 - MPMX26_01773 0.72 -1.2 1,834,713 - MPMX26_01773 0.84 -0.4 1,834,754 - -0.4
Or see this region's nucleotide sequence