Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01468

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01466 and MPMX26_01467 are separated by 136 nucleotidesMPMX26_01467 and MPMX26_01468 are separated by 32 nucleotidesMPMX26_01468 and MPMX26_01469 are separated by 432 nucleotides MPMX26_01466: MPMX26_01466 - Bifunctional protein PutA, at 1,516,543 to 1,520,295 _01466 MPMX26_01467: MPMX26_01467 - Leucine-responsive regulatory protein, at 1,520,432 to 1,520,920 _01467 MPMX26_01468: MPMX26_01468 - Sodium/proline symporter, at 1,520,953 to 1,522,443 _01468 MPMX26_01469: MPMX26_01469 - Aspartate ammonia-lyase, at 1,522,876 to 1,524,330 _01469 Position (kb) 1520 1521 1522 1523Strain fitness (log2 ratio) -1 0 1 2at 1520.467 kb on + strandat 1520.521 kb on + strand, within MPMX26_01467at 1520.521 kb on + strand, within MPMX26_01467at 1520.531 kb on + strand, within MPMX26_01467at 1520.563 kb on + strand, within MPMX26_01467at 1520.564 kb on + strand, within MPMX26_01467at 1520.669 kb on + strand, within MPMX26_01467at 1520.669 kb on + strand, within MPMX26_01467at 1520.857 kb on + strand, within MPMX26_01467at 1521.018 kb on - strandat 1521.018 kb on - strandat 1521.037 kb on - strandat 1521.037 kb on - strandat 1521.037 kb on - strandat 1521.037 kb on - strandat 1521.142 kb on - strand, within MPMX26_01468at 1521.142 kb on - strand, within MPMX26_01468at 1521.163 kb on - strand, within MPMX26_01468at 1521.168 kb on - strand, within MPMX26_01468at 1521.195 kb on - strand, within MPMX26_01468at 1521.213 kb on - strand, within MPMX26_01468at 1521.225 kb on - strand, within MPMX26_01468at 1521.225 kb on - strand, within MPMX26_01468at 1521.225 kb on - strand, within MPMX26_01468at 1521.225 kb on - strand, within MPMX26_01468at 1521.255 kb on - strand, within MPMX26_01468at 1521.262 kb on - strand, within MPMX26_01468at 1521.331 kb on - strand, within MPMX26_01468at 1521.331 kb on - strand, within MPMX26_01468at 1521.331 kb on - strand, within MPMX26_01468at 1521.331 kb on - strand, within MPMX26_01468at 1521.331 kb on - strand, within MPMX26_01468at 1521.336 kb on - strand, within MPMX26_01468at 1521.390 kb on - strand, within MPMX26_01468at 1521.432 kb on - strand, within MPMX26_01468at 1521.432 kb on - strand, within MPMX26_01468at 1521.432 kb on - strand, within MPMX26_01468at 1521.435 kb on - strand, within MPMX26_01468at 1521.435 kb on - strand, within MPMX26_01468at 1521.435 kb on - strand, within MPMX26_01468at 1521.435 kb on - strand, within MPMX26_01468at 1521.462 kb on - strand, within MPMX26_01468at 1521.555 kb on - strand, within MPMX26_01468at 1521.562 kb on - strand, within MPMX26_01468at 1521.618 kb on - strand, within MPMX26_01468at 1521.618 kb on - strand, within MPMX26_01468at 1521.691 kb on - strand, within MPMX26_01468at 1521.706 kb on - strand, within MPMX26_01468at 1521.718 kb on - strand, within MPMX26_01468at 1521.723 kb on - strand, within MPMX26_01468at 1521.723 kb on - strand, within MPMX26_01468at 1521.780 kb on - strand, within MPMX26_01468at 1521.790 kb on - strand, within MPMX26_01468at 1521.790 kb on - strand, within MPMX26_01468at 1521.790 kb on - strand, within MPMX26_01468at 1521.802 kb on - strand, within MPMX26_01468at 1521.802 kb on - strand, within MPMX26_01468at 1521.949 kb on - strand, within MPMX26_01468at 1521.954 kb on - strand, within MPMX26_01468at 1521.954 kb on - strand, within MPMX26_01468at 1521.954 kb on - strand, within MPMX26_01468at 1521.954 kb on - strand, within MPMX26_01468at 1521.957 kb on - strand, within MPMX26_01468at 1522.027 kb on - strand, within MPMX26_01468at 1522.027 kb on - strand, within MPMX26_01468at 1522.264 kb on - strand, within MPMX26_01468at 1522.287 kb on - strand, within MPMX26_01468at 1522.323 kb on - strandat 1522.329 kb on - strandat 1522.329 kb on - strandat 1522.363 kb on - strandat 1522.392 kb on - strandat 1522.430 kb on - strandat 1523.257 kb on + strand, within MPMX26_01469at 1523.358 kb on + strand, within MPMX26_01469at 1523.371 kb on + strand, within MPMX26_01469at 1523.415 kb on + strand, within MPMX26_01469at 1523.440 kb on + strand, within MPMX26_01469

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,520,467 + -0.0
1,520,521 + MPMX26_01467 0.18 +0.2
1,520,521 + MPMX26_01467 0.18 +0.4
1,520,531 + MPMX26_01467 0.20 +0.9
1,520,563 + MPMX26_01467 0.27 +0.3
1,520,564 + MPMX26_01467 0.27 +0.8
1,520,669 + MPMX26_01467 0.48 +0.9
1,520,669 + MPMX26_01467 0.48 +0.5
1,520,857 + MPMX26_01467 0.87 -0.8
1,521,018 - -1.3
1,521,018 - +0.8
1,521,037 - -0.1
1,521,037 - -0.2
1,521,037 - +0.2
1,521,037 - -0.5
1,521,142 - MPMX26_01468 0.13 +0.4
1,521,142 - MPMX26_01468 0.13 +0.1
1,521,163 - MPMX26_01468 0.14 +0.5
1,521,168 - MPMX26_01468 0.14 +0.3
1,521,195 - MPMX26_01468 0.16 +0.4
1,521,213 - MPMX26_01468 0.17 +0.3
1,521,225 - MPMX26_01468 0.18 -0.6
1,521,225 - MPMX26_01468 0.18 +0.6
1,521,225 - MPMX26_01468 0.18 +0.5
1,521,225 - MPMX26_01468 0.18 +0.4
1,521,255 - MPMX26_01468 0.20 -0.4
1,521,262 - MPMX26_01468 0.21 +1.2
1,521,331 - MPMX26_01468 0.25 +0.1
1,521,331 - MPMX26_01468 0.25 +0.0
1,521,331 - MPMX26_01468 0.25 -1.0
1,521,331 - MPMX26_01468 0.25 +0.3
1,521,331 - MPMX26_01468 0.25 +1.1
1,521,336 - MPMX26_01468 0.26 +0.3
1,521,390 - MPMX26_01468 0.29 +0.1
1,521,432 - MPMX26_01468 0.32 +0.1
1,521,432 - MPMX26_01468 0.32 +0.0
1,521,432 - MPMX26_01468 0.32 +0.5
1,521,435 - MPMX26_01468 0.32 -0.4
1,521,435 - MPMX26_01468 0.32 -0.3
1,521,435 - MPMX26_01468 0.32 +0.1
1,521,435 - MPMX26_01468 0.32 -0.5
1,521,462 - MPMX26_01468 0.34 -1.3
1,521,555 - MPMX26_01468 0.40 +0.8
1,521,562 - MPMX26_01468 0.41 +0.1
1,521,618 - MPMX26_01468 0.45 +0.1
1,521,618 - MPMX26_01468 0.45 +0.8
1,521,691 - MPMX26_01468 0.49 -0.5
1,521,706 - MPMX26_01468 0.51 +0.2
1,521,718 - MPMX26_01468 0.51 +1.9
1,521,723 - MPMX26_01468 0.52 -0.2
1,521,723 - MPMX26_01468 0.52 +0.1
1,521,780 - MPMX26_01468 0.55 +0.8
1,521,790 - MPMX26_01468 0.56 -0.2
1,521,790 - MPMX26_01468 0.56 -0.3
1,521,790 - MPMX26_01468 0.56 +0.2
1,521,802 - MPMX26_01468 0.57 +0.2
1,521,802 - MPMX26_01468 0.57 +0.1
1,521,949 - MPMX26_01468 0.67 +0.1
1,521,954 - MPMX26_01468 0.67 +1.5
1,521,954 - MPMX26_01468 0.67 +0.5
1,521,954 - MPMX26_01468 0.67 -0.8
1,521,954 - MPMX26_01468 0.67 +0.6
1,521,957 - MPMX26_01468 0.67 -0.4
1,522,027 - MPMX26_01468 0.72 -0.2
1,522,027 - MPMX26_01468 0.72 +1.1
1,522,264 - MPMX26_01468 0.88 -1.0
1,522,287 - MPMX26_01468 0.89 +0.4
1,522,323 - -0.2
1,522,329 - -0.8
1,522,329 - -0.4
1,522,363 - -0.3
1,522,392 - +0.3
1,522,430 - +0.3
1,523,257 + MPMX26_01469 0.26 -0.1
1,523,358 + MPMX26_01469 0.33 +0.2
1,523,371 + MPMX26_01469 0.34 +0.8
1,523,415 + MPMX26_01469 0.37 -0.2
1,523,440 + MPMX26_01469 0.39 -0.9

Or see this region's nucleotide sequence