Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01216

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01214 and MPMX26_01215 are separated by 24 nucleotidesMPMX26_01215 and MPMX26_01216 overlap by 4 nucleotidesMPMX26_01216 and MPMX26_01217 are separated by 44 nucleotidesMPMX26_01217 and MPMX26_01218 are separated by 14 nucleotides MPMX26_01214: MPMX26_01214 - Ribosomal RNA small subunit methyltransferase G, at 1,290,178 to 1,290,810 _01214 MPMX26_01215: MPMX26_01215 - Sporulation initiation inhibitor protein Soj, at 1,290,835 to 1,291,617 _01215 MPMX26_01216: MPMX26_01216 - putative chromosome-partitioning protein ParB, at 1,291,614 to 1,292,501 _01216 MPMX26_01217: MPMX26_01217 - Biopolymer transport protein ExbB, at 1,292,546 to 1,293,178 _01217 MPMX26_01218: MPMX26_01218 - Tol-Pal system protein TolR, at 1,293,193 to 1,293,615 _01218 Position (kb) 1291 1292 1293Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1290.642 kb on + strand, within MPMX26_01214at 1290.644 kb on + strand, within MPMX26_01214at 1290.651 kb on + strand, within MPMX26_01214at 1290.652 kb on + strand, within MPMX26_01214at 1290.653 kb on + strand, within MPMX26_01214at 1290.653 kb on + strand, within MPMX26_01214at 1290.665 kb on + strand, within MPMX26_01214at 1290.665 kb on + strand, within MPMX26_01214at 1290.673 kb on + strand, within MPMX26_01214at 1290.673 kb on + strand, within MPMX26_01214at 1290.673 kb on + strand, within MPMX26_01214at 1290.685 kb on + strand, within MPMX26_01214at 1290.828 kb on + strandat 1290.828 kb on + strandat 1290.838 kb on + strandat 1290.838 kb on + strandat 1290.838 kb on + strandat 1290.861 kb on + strandat 1290.882 kb on + strandat 1290.889 kb on + strandat 1290.892 kb on + strandat 1290.972 kb on + strand, within MPMX26_01215at 1290.975 kb on + strand, within MPMX26_01215at 1290.977 kb on + strand, within MPMX26_01215at 1290.977 kb on + strand, within MPMX26_01215at 1290.977 kb on + strand, within MPMX26_01215at 1290.977 kb on + strand, within MPMX26_01215at 1290.977 kb on + strand, within MPMX26_01215at 1290.977 kb on + strand, within MPMX26_01215at 1291.002 kb on + strand, within MPMX26_01215at 1291.002 kb on + strand, within MPMX26_01215at 1291.002 kb on + strand, within MPMX26_01215at 1291.016 kb on + strand, within MPMX26_01215at 1291.024 kb on + strand, within MPMX26_01215at 1291.029 kb on + strand, within MPMX26_01215at 1291.031 kb on + strand, within MPMX26_01215at 1291.089 kb on + strand, within MPMX26_01215at 1291.094 kb on + strand, within MPMX26_01215at 1291.094 kb on + strand, within MPMX26_01215at 1291.094 kb on + strand, within MPMX26_01215at 1291.094 kb on + strand, within MPMX26_01215at 1291.104 kb on + strand, within MPMX26_01215at 1291.109 kb on + strand, within MPMX26_01215at 1291.134 kb on + strand, within MPMX26_01215at 1291.182 kb on + strand, within MPMX26_01215at 1291.211 kb on + strand, within MPMX26_01215at 1291.217 kb on + strand, within MPMX26_01215at 1291.232 kb on + strand, within MPMX26_01215at 1291.232 kb on + strand, within MPMX26_01215at 1291.247 kb on + strand, within MPMX26_01215at 1291.252 kb on + strand, within MPMX26_01215at 1291.252 kb on + strand, within MPMX26_01215at 1291.252 kb on + strand, within MPMX26_01215at 1291.252 kb on + strand, within MPMX26_01215at 1291.252 kb on + strand, within MPMX26_01215at 1291.257 kb on + strand, within MPMX26_01215at 1291.257 kb on + strand, within MPMX26_01215at 1291.257 kb on + strand, within MPMX26_01215at 1291.257 kb on + strand, within MPMX26_01215at 1291.257 kb on + strand, within MPMX26_01215at 1291.257 kb on + strand, within MPMX26_01215at 1291.259 kb on + strand, within MPMX26_01215at 1291.268 kb on + strand, within MPMX26_01215at 1291.277 kb on + strand, within MPMX26_01215at 1291.278 kb on + strand, within MPMX26_01215at 1291.282 kb on + strand, within MPMX26_01215at 1291.284 kb on + strand, within MPMX26_01215at 1291.284 kb on + strand, within MPMX26_01215at 1291.322 kb on + strand, within MPMX26_01215at 1291.331 kb on + strand, within MPMX26_01215at 1291.344 kb on + strand, within MPMX26_01215at 1291.344 kb on + strand, within MPMX26_01215at 1291.344 kb on + strand, within MPMX26_01215at 1291.349 kb on + strand, within MPMX26_01215at 1291.349 kb on + strand, within MPMX26_01215at 1291.349 kb on + strand, within MPMX26_01215at 1291.349 kb on + strand, within MPMX26_01215at 1291.349 kb on + strand, within MPMX26_01215at 1291.349 kb on + strand, within MPMX26_01215at 1291.374 kb on + strand, within MPMX26_01215at 1291.374 kb on + strand, within MPMX26_01215at 1291.382 kb on + strand, within MPMX26_01215at 1291.402 kb on + strand, within MPMX26_01215at 1291.402 kb on + strand, within MPMX26_01215at 1291.402 kb on + strand, within MPMX26_01215at 1291.402 kb on + strand, within MPMX26_01215at 1291.402 kb on + strand, within MPMX26_01215at 1291.402 kb on + strand, within MPMX26_01215at 1291.427 kb on + strand, within MPMX26_01215at 1291.463 kb on + strand, within MPMX26_01215at 1291.463 kb on + strand, within MPMX26_01215at 1291.488 kb on + strand, within MPMX26_01215at 1291.488 kb on + strand, within MPMX26_01215at 1291.535 kb on + strand, within MPMX26_01215at 1291.544 kb on + strandat 1291.546 kb on + strandat 1291.667 kb on + strandat 1291.748 kb on + strand, within MPMX26_01216at 1291.759 kb on + strand, within MPMX26_01216at 1291.777 kb on + strand, within MPMX26_01216at 1291.826 kb on + strand, within MPMX26_01216at 1291.826 kb on + strand, within MPMX26_01216at 1291.831 kb on + strand, within MPMX26_01216at 1291.831 kb on + strand, within MPMX26_01216at 1291.904 kb on + strand, within MPMX26_01216at 1291.978 kb on + strand, within MPMX26_01216at 1292.043 kb on + strand, within MPMX26_01216at 1292.098 kb on + strand, within MPMX26_01216at 1292.098 kb on + strand, within MPMX26_01216at 1292.109 kb on + strand, within MPMX26_01216at 1292.144 kb on + strand, within MPMX26_01216at 1292.144 kb on + strand, within MPMX26_01216at 1292.150 kb on + strand, within MPMX26_01216at 1292.160 kb on + strand, within MPMX26_01216at 1292.160 kb on + strand, within MPMX26_01216at 1292.247 kb on + strand, within MPMX26_01216at 1292.269 kb on + strand, within MPMX26_01216at 1292.289 kb on + strand, within MPMX26_01216at 1292.304 kb on + strand, within MPMX26_01216at 1292.304 kb on + strand, within MPMX26_01216at 1292.314 kb on + strand, within MPMX26_01216at 1292.314 kb on + strand, within MPMX26_01216at 1292.314 kb on + strand, within MPMX26_01216at 1292.314 kb on + strand, within MPMX26_01216at 1292.353 kb on + strand, within MPMX26_01216at 1292.353 kb on + strand, within MPMX26_01216at 1292.353 kb on + strand, within MPMX26_01216at 1292.358 kb on + strand, within MPMX26_01216at 1292.465 kb on + strandat 1292.465 kb on + strandat 1292.496 kb on + strandat 1292.496 kb on + strandat 1292.539 kb on + strandat 1292.542 kb on - strandat 1292.574 kb on + strandat 1292.574 kb on + strandat 1292.574 kb on + strandat 1292.574 kb on + strandat 1292.598 kb on + strandat 1292.603 kb on + strandat 1292.632 kb on + strand, within MPMX26_01217at 1292.632 kb on + strand, within MPMX26_01217at 1292.661 kb on + strand, within MPMX26_01217at 1292.664 kb on + strand, within MPMX26_01217at 1292.715 kb on + strand, within MPMX26_01217at 1292.726 kb on + strand, within MPMX26_01217at 1292.727 kb on + strand, within MPMX26_01217at 1292.727 kb on + strand, within MPMX26_01217at 1292.727 kb on + strand, within MPMX26_01217at 1292.740 kb on + strand, within MPMX26_01217at 1292.764 kb on + strand, within MPMX26_01217at 1292.771 kb on + strand, within MPMX26_01217at 1292.771 kb on + strand, within MPMX26_01217at 1292.771 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.800 kb on + strand, within MPMX26_01217at 1292.810 kb on + strand, within MPMX26_01217at 1292.878 kb on + strand, within MPMX26_01217at 1292.881 kb on + strand, within MPMX26_01217at 1292.886 kb on + strand, within MPMX26_01217at 1292.906 kb on + strand, within MPMX26_01217at 1292.908 kb on + strand, within MPMX26_01217at 1292.908 kb on + strand, within MPMX26_01217at 1292.908 kb on + strand, within MPMX26_01217at 1292.908 kb on + strand, within MPMX26_01217at 1292.911 kb on + strand, within MPMX26_01217at 1292.911 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.913 kb on + strand, within MPMX26_01217at 1292.918 kb on + strand, within MPMX26_01217at 1292.918 kb on + strand, within MPMX26_01217at 1292.918 kb on + strand, within MPMX26_01217at 1292.923 kb on + strand, within MPMX26_01217at 1292.923 kb on + strand, within MPMX26_01217at 1292.957 kb on + strand, within MPMX26_01217at 1292.975 kb on + strand, within MPMX26_01217at 1293.087 kb on + strand, within MPMX26_01217at 1293.096 kb on + strand, within MPMX26_01217at 1293.128 kb on + strandat 1293.133 kb on + strandat 1293.311 kb on + strand, within MPMX26_01218at 1293.321 kb on + strand, within MPMX26_01218

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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1,290,642 + MPMX26_01214 0.73 +0.2
1,290,644 + MPMX26_01214 0.74 -0.3
1,290,651 + MPMX26_01214 0.75 -0.3
1,290,652 + MPMX26_01214 0.75 -0.1
1,290,653 + MPMX26_01214 0.75 +0.1
1,290,653 + MPMX26_01214 0.75 -0.1
1,290,665 + MPMX26_01214 0.77 -0.6
1,290,665 + MPMX26_01214 0.77 +0.4
1,290,673 + MPMX26_01214 0.78 +0.4
1,290,673 + MPMX26_01214 0.78 -0.2
1,290,673 + MPMX26_01214 0.78 +0.2
1,290,685 + MPMX26_01214 0.80 -0.1
1,290,828 + -2.0
1,290,828 + -0.9
1,290,838 + -0.2
1,290,838 + -1.3
1,290,838 + -0.8
1,290,861 + -1.3
1,290,882 + -0.4
1,290,889 + -1.5
1,290,892 + -0.7
1,290,972 + MPMX26_01215 0.17 -1.0
1,290,975 + MPMX26_01215 0.18 -0.3
1,290,977 + MPMX26_01215 0.18 -0.4
1,290,977 + MPMX26_01215 0.18 -0.2
1,290,977 + MPMX26_01215 0.18 -0.2
1,290,977 + MPMX26_01215 0.18 +0.9
1,290,977 + MPMX26_01215 0.18 -1.3
1,290,977 + MPMX26_01215 0.18 -0.9
1,291,002 + MPMX26_01215 0.21 -0.6
1,291,002 + MPMX26_01215 0.21 -0.7
1,291,002 + MPMX26_01215 0.21 -0.7
1,291,016 + MPMX26_01215 0.23 -0.2
1,291,024 + MPMX26_01215 0.24 -0.3
1,291,029 + MPMX26_01215 0.25 -0.4
1,291,031 + MPMX26_01215 0.25 -0.6
1,291,089 + MPMX26_01215 0.32 -1.4
1,291,094 + MPMX26_01215 0.33 -0.7
1,291,094 + MPMX26_01215 0.33 -0.5
1,291,094 + MPMX26_01215 0.33 -1.6
1,291,094 + MPMX26_01215 0.33 -1.2
1,291,104 + MPMX26_01215 0.34 -0.2
1,291,109 + MPMX26_01215 0.35 -0.9
1,291,134 + MPMX26_01215 0.38 -1.3
1,291,182 + MPMX26_01215 0.44 -0.6
1,291,211 + MPMX26_01215 0.48 -0.2
1,291,217 + MPMX26_01215 0.49 -0.5
1,291,232 + MPMX26_01215 0.51 -1.0
1,291,232 + MPMX26_01215 0.51 -0.8
1,291,247 + MPMX26_01215 0.53 -1.5
1,291,252 + MPMX26_01215 0.53 -0.3
1,291,252 + MPMX26_01215 0.53 -1.4
1,291,252 + MPMX26_01215 0.53 -1.1
1,291,252 + MPMX26_01215 0.53 -0.3
1,291,252 + MPMX26_01215 0.53 -1.0
1,291,257 + MPMX26_01215 0.54 -1.0
1,291,257 + MPMX26_01215 0.54 -0.6
1,291,257 + MPMX26_01215 0.54 -0.2
1,291,257 + MPMX26_01215 0.54 -0.8
1,291,257 + MPMX26_01215 0.54 -0.5
1,291,257 + MPMX26_01215 0.54 -0.6
1,291,259 + MPMX26_01215 0.54 -1.2
1,291,268 + MPMX26_01215 0.55 -1.8
1,291,277 + MPMX26_01215 0.56 -1.7
1,291,278 + MPMX26_01215 0.57 -0.2
1,291,282 + MPMX26_01215 0.57 -2.0
1,291,284 + MPMX26_01215 0.57 -0.2
1,291,284 + MPMX26_01215 0.57 -1.0
1,291,322 + MPMX26_01215 0.62 +0.9
1,291,331 + MPMX26_01215 0.63 -1.4
1,291,344 + MPMX26_01215 0.65 -0.3
1,291,344 + MPMX26_01215 0.65 -0.9
1,291,344 + MPMX26_01215 0.65 -0.9
1,291,349 + MPMX26_01215 0.66 -0.8
1,291,349 + MPMX26_01215 0.66 -1.1
1,291,349 + MPMX26_01215 0.66 -0.6
1,291,349 + MPMX26_01215 0.66 -0.6
1,291,349 + MPMX26_01215 0.66 -0.4
1,291,349 + MPMX26_01215 0.66 -0.5
1,291,374 + MPMX26_01215 0.69 -0.2
1,291,374 + MPMX26_01215 0.69 -0.5
1,291,382 + MPMX26_01215 0.70 -1.8
1,291,402 + MPMX26_01215 0.72 -0.3
1,291,402 + MPMX26_01215 0.72 -0.5
1,291,402 + MPMX26_01215 0.72 -0.2
1,291,402 + MPMX26_01215 0.72 -0.4
1,291,402 + MPMX26_01215 0.72 -0.1
1,291,402 + MPMX26_01215 0.72 -1.5
1,291,427 + MPMX26_01215 0.76 -0.1
1,291,463 + MPMX26_01215 0.80 -0.9
1,291,463 + MPMX26_01215 0.80 -1.0
1,291,488 + MPMX26_01215 0.83 -0.4
1,291,488 + MPMX26_01215 0.83 -0.5
1,291,535 + MPMX26_01215 0.89 +0.2
1,291,544 + -2.1
1,291,546 + -0.6
1,291,667 + -0.8
1,291,748 + MPMX26_01216 0.15 -1.2
1,291,759 + MPMX26_01216 0.16 -0.6
1,291,777 + MPMX26_01216 0.18 -1.1
1,291,826 + MPMX26_01216 0.24 -0.5
1,291,826 + MPMX26_01216 0.24 -0.9
1,291,831 + MPMX26_01216 0.24 -1.8
1,291,831 + MPMX26_01216 0.24 -0.4
1,291,904 + MPMX26_01216 0.33 -0.5
1,291,978 + MPMX26_01216 0.41 -0.5
1,292,043 + MPMX26_01216 0.48 -2.9
1,292,098 + MPMX26_01216 0.55 +0.0
1,292,098 + MPMX26_01216 0.55 +0.7
1,292,109 + MPMX26_01216 0.56 +0.0
1,292,144 + MPMX26_01216 0.60 -1.4
1,292,144 + MPMX26_01216 0.60 -1.1
1,292,150 + MPMX26_01216 0.60 -1.3
1,292,160 + MPMX26_01216 0.61 -0.4
1,292,160 + MPMX26_01216 0.61 -0.9
1,292,247 + MPMX26_01216 0.71 -1.3
1,292,269 + MPMX26_01216 0.74 +1.1
1,292,289 + MPMX26_01216 0.76 -0.3
1,292,304 + MPMX26_01216 0.78 -1.2
1,292,304 + MPMX26_01216 0.78 -0.7
1,292,314 + MPMX26_01216 0.79 -1.8
1,292,314 + MPMX26_01216 0.79 -0.9
1,292,314 + MPMX26_01216 0.79 -0.6
1,292,314 + MPMX26_01216 0.79 -0.5
1,292,353 + MPMX26_01216 0.83 -0.8
1,292,353 + MPMX26_01216 0.83 -0.7
1,292,353 + MPMX26_01216 0.83 -1.8
1,292,358 + MPMX26_01216 0.84 -1.7
1,292,465 + -1.6
1,292,465 + -2.4
1,292,496 + -0.3
1,292,496 + -0.1
1,292,539 + +0.2
1,292,542 - +0.1
1,292,574 + -1.0
1,292,574 + -0.6
1,292,574 + +1.8
1,292,574 + +1.1
1,292,598 + -0.5
1,292,603 + +0.2
1,292,632 + MPMX26_01217 0.14 +0.3
1,292,632 + MPMX26_01217 0.14 +0.2
1,292,661 + MPMX26_01217 0.18 -0.3
1,292,664 + MPMX26_01217 0.19 +0.4
1,292,715 + MPMX26_01217 0.27 -0.6
1,292,726 + MPMX26_01217 0.28 +0.8
1,292,727 + MPMX26_01217 0.29 +0.4
1,292,727 + MPMX26_01217 0.29 -0.1
1,292,727 + MPMX26_01217 0.29 +1.4
1,292,740 + MPMX26_01217 0.31 -0.2
1,292,764 + MPMX26_01217 0.34 +0.0
1,292,771 + MPMX26_01217 0.36 -0.1
1,292,771 + MPMX26_01217 0.36 +0.9
1,292,771 + MPMX26_01217 0.36 -0.4
1,292,800 + MPMX26_01217 0.40 -0.1
1,292,800 + MPMX26_01217 0.40 +0.1
1,292,800 + MPMX26_01217 0.40 -0.3
1,292,800 + MPMX26_01217 0.40 +0.4
1,292,800 + MPMX26_01217 0.40 +0.3
1,292,810 + MPMX26_01217 0.42 -0.1
1,292,878 + MPMX26_01217 0.52 +0.1
1,292,881 + MPMX26_01217 0.53 -0.3
1,292,886 + MPMX26_01217 0.54 +0.0
1,292,906 + MPMX26_01217 0.57 +0.5
1,292,908 + MPMX26_01217 0.57 -1.0
1,292,908 + MPMX26_01217 0.57 -0.4
1,292,908 + MPMX26_01217 0.57 +0.1
1,292,908 + MPMX26_01217 0.57 -0.3
1,292,911 + MPMX26_01217 0.58 +0.3
1,292,911 + MPMX26_01217 0.58 -0.4
1,292,913 + MPMX26_01217 0.58 -0.2
1,292,913 + MPMX26_01217 0.58 +0.9
1,292,913 + MPMX26_01217 0.58 +0.0
1,292,913 + MPMX26_01217 0.58 -0.7
1,292,913 + MPMX26_01217 0.58 -0.9
1,292,918 + MPMX26_01217 0.59 +0.8
1,292,918 + MPMX26_01217 0.59 +0.4
1,292,918 + MPMX26_01217 0.59 +0.0
1,292,923 + MPMX26_01217 0.60 -0.3
1,292,923 + MPMX26_01217 0.60 +0.6
1,292,957 + MPMX26_01217 0.65 +0.3
1,292,975 + MPMX26_01217 0.68 -0.3
1,293,087 + MPMX26_01217 0.85 +0.4
1,293,096 + MPMX26_01217 0.87 -0.3
1,293,128 + +0.3
1,293,133 + -0.3
1,293,311 + MPMX26_01218 0.28 +0.1
1,293,321 + MPMX26_01218 0.30 -0.2

Or see this region's nucleotide sequence