Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00232

Experiment: L-Glutamine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00231 and MPMX26_00232 are separated by 148 nucleotidesMPMX26_00232 and MPMX26_00233 are separated by 227 nucleotides MPMX26_00231: MPMX26_00231 - Putative multidrug export ATP-binding/permease protein, at 250,426 to 252,228 _00231 MPMX26_00232: MPMX26_00232 - hypothetical protein, at 252,377 to 252,991 _00232 MPMX26_00233: MPMX26_00233 - HTH-type transcriptional regulator KipR, at 253,219 to 253,989 _00233 Position (kb) 252 253Strain fitness (log2 ratio) -2 -1 0 1 2 3at 251.383 kb on - strand, within MPMX26_00231at 251.437 kb on - strand, within MPMX26_00231at 251.527 kb on - strand, within MPMX26_00231at 251.527 kb on - strand, within MPMX26_00231at 251.645 kb on + strand, within MPMX26_00231at 251.928 kb on - strand, within MPMX26_00231at 251.928 kb on - strand, within MPMX26_00231at 252.045 kb on - strand, within MPMX26_00231at 252.086 kb on - strandat 252.164 kb on - strandat 252.164 kb on - strandat 252.349 kb on + strandat 252.349 kb on + strandat 252.354 kb on + strandat 252.374 kb on + strandat 252.503 kb on + strand, within MPMX26_00232at 252.539 kb on + strand, within MPMX26_00232at 252.680 kb on + strand, within MPMX26_00232at 252.686 kb on + strand, within MPMX26_00232at 252.688 kb on + strand, within MPMX26_00232at 252.741 kb on + strand, within MPMX26_00232at 252.741 kb on + strand, within MPMX26_00232at 252.795 kb on + strand, within MPMX26_00232at 252.795 kb on + strand, within MPMX26_00232at 252.854 kb on + strand, within MPMX26_00232at 252.937 kb on + strandat 252.941 kb on + strandat 252.951 kb on + strandat 253.003 kb on + strandat 253.030 kb on + strandat 253.044 kb on - strandat 253.062 kb on - strandat 253.062 kb on - strandat 253.067 kb on - strandat 253.100 kb on - strandat 253.220 kb on - strandat 253.291 kb on - strandat 253.303 kb on - strand, within MPMX26_00233at 253.319 kb on - strand, within MPMX26_00233at 253.333 kb on - strand, within MPMX26_00233at 253.333 kb on - strand, within MPMX26_00233at 253.333 kb on - strand, within MPMX26_00233at 253.338 kb on - strand, within MPMX26_00233at 253.338 kb on - strand, within MPMX26_00233at 253.338 kb on - strand, within MPMX26_00233at 253.348 kb on - strand, within MPMX26_00233at 253.387 kb on - strand, within MPMX26_00233at 253.387 kb on - strand, within MPMX26_00233at 253.406 kb on - strand, within MPMX26_00233at 253.406 kb on - strand, within MPMX26_00233at 253.412 kb on - strand, within MPMX26_00233at 253.413 kb on - strand, within MPMX26_00233at 253.417 kb on - strand, within MPMX26_00233at 253.417 kb on - strand, within MPMX26_00233at 253.417 kb on - strand, within MPMX26_00233at 253.417 kb on - strand, within MPMX26_00233at 253.469 kb on - strand, within MPMX26_00233at 253.469 kb on - strand, within MPMX26_00233at 253.469 kb on - strand, within MPMX26_00233at 253.504 kb on - strand, within MPMX26_00233at 253.504 kb on - strand, within MPMX26_00233at 253.514 kb on - strand, within MPMX26_00233at 253.618 kb on - strand, within MPMX26_00233at 253.623 kb on - strand, within MPMX26_00233at 253.641 kb on - strand, within MPMX26_00233at 253.649 kb on - strand, within MPMX26_00233at 253.656 kb on - strand, within MPMX26_00233at 253.656 kb on - strand, within MPMX26_00233at 253.656 kb on - strand, within MPMX26_00233at 253.661 kb on - strand, within MPMX26_00233at 253.669 kb on - strand, within MPMX26_00233at 253.741 kb on - strand, within MPMX26_00233at 253.741 kb on - strand, within MPMX26_00233at 253.741 kb on - strand, within MPMX26_00233at 253.741 kb on - strand, within MPMX26_00233at 253.746 kb on - strand, within MPMX26_00233at 253.751 kb on - strand, within MPMX26_00233at 253.751 kb on - strand, within MPMX26_00233at 253.760 kb on - strand, within MPMX26_00233at 253.777 kb on - strand, within MPMX26_00233at 253.777 kb on - strand, within MPMX26_00233at 253.782 kb on - strand, within MPMX26_00233at 253.852 kb on - strand, within MPMX26_00233at 253.876 kb on - strand, within MPMX26_00233at 253.884 kb on - strand, within MPMX26_00233at 253.888 kb on - strand, within MPMX26_00233at 253.904 kb on - strand, within MPMX26_00233

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Glutamine (N)
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251,383 - MPMX26_00231 0.53 +0.0
251,437 - MPMX26_00231 0.56 -0.4
251,527 - MPMX26_00231 0.61 -1.0
251,527 - MPMX26_00231 0.61 +0.5
251,645 + MPMX26_00231 0.68 +1.3
251,928 - MPMX26_00231 0.83 -2.1
251,928 - MPMX26_00231 0.83 +0.8
252,045 - MPMX26_00231 0.90 -0.3
252,086 - -0.4
252,164 - -0.0
252,164 - +1.2
252,349 + -0.0
252,349 + +0.7
252,354 + +1.8
252,374 + +0.6
252,503 + MPMX26_00232 0.20 +0.0
252,539 + MPMX26_00232 0.26 +0.4
252,680 + MPMX26_00232 0.49 +1.7
252,686 + MPMX26_00232 0.50 +0.3
252,688 + MPMX26_00232 0.51 +0.2
252,741 + MPMX26_00232 0.59 +0.2
252,741 + MPMX26_00232 0.59 +0.5
252,795 + MPMX26_00232 0.68 +1.4
252,795 + MPMX26_00232 0.68 -1.0
252,854 + MPMX26_00232 0.78 +0.6
252,937 + +0.5
252,941 + +0.4
252,951 + -0.8
253,003 + +1.4
253,030 + +0.4
253,044 - -0.3
253,062 - +0.8
253,062 - -0.1
253,067 - -0.3
253,100 - +0.6
253,220 - +0.7
253,291 - -0.3
253,303 - MPMX26_00233 0.11 +0.4
253,319 - MPMX26_00233 0.13 -0.5
253,333 - MPMX26_00233 0.15 -0.1
253,333 - MPMX26_00233 0.15 -0.5
253,333 - MPMX26_00233 0.15 -0.8
253,338 - MPMX26_00233 0.15 +0.5
253,338 - MPMX26_00233 0.15 -0.1
253,338 - MPMX26_00233 0.15 -0.5
253,348 - MPMX26_00233 0.17 +1.1
253,387 - MPMX26_00233 0.22 -0.2
253,387 - MPMX26_00233 0.22 -0.4
253,406 - MPMX26_00233 0.24 -0.6
253,406 - MPMX26_00233 0.24 -0.3
253,412 - MPMX26_00233 0.25 +0.0
253,413 - MPMX26_00233 0.25 +0.3
253,417 - MPMX26_00233 0.26 -0.3
253,417 - MPMX26_00233 0.26 -0.3
253,417 - MPMX26_00233 0.26 +0.1
253,417 - MPMX26_00233 0.26 +0.4
253,469 - MPMX26_00233 0.32 +1.7
253,469 - MPMX26_00233 0.32 -0.0
253,469 - MPMX26_00233 0.32 -0.1
253,504 - MPMX26_00233 0.37 +0.0
253,504 - MPMX26_00233 0.37 -0.4
253,514 - MPMX26_00233 0.38 -0.6
253,618 - MPMX26_00233 0.52 +0.1
253,623 - MPMX26_00233 0.52 +0.2
253,641 - MPMX26_00233 0.55 +0.3
253,649 - MPMX26_00233 0.56 -0.8
253,656 - MPMX26_00233 0.57 -0.0
253,656 - MPMX26_00233 0.57 +0.1
253,656 - MPMX26_00233 0.57 +0.1
253,661 - MPMX26_00233 0.57 -0.8
253,669 - MPMX26_00233 0.58 +0.0
253,741 - MPMX26_00233 0.68 -0.2
253,741 - MPMX26_00233 0.68 -0.0
253,741 - MPMX26_00233 0.68 -0.1
253,741 - MPMX26_00233 0.68 -0.4
253,746 - MPMX26_00233 0.68 -0.2
253,751 - MPMX26_00233 0.69 +0.1
253,751 - MPMX26_00233 0.69 +0.9
253,760 - MPMX26_00233 0.70 -0.2
253,777 - MPMX26_00233 0.72 -0.0
253,777 - MPMX26_00233 0.72 +0.3
253,782 - MPMX26_00233 0.73 -0.6
253,852 - MPMX26_00233 0.82 +0.1
253,876 - MPMX26_00233 0.85 +2.9
253,884 - MPMX26_00233 0.86 +1.5
253,888 - MPMX26_00233 0.87 -0.1
253,904 - MPMX26_00233 0.89 +1.2

Or see this region's nucleotide sequence