Strain Fitness in Escherichia fergusonii Becca around EFB2_04496

Experiment: BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)
4,713,538	+		EFB2_04495	0.35	+1.0
4,713,538	+		EFB2_04495	0.35	-1.6
4,713,551	+		EFB2_04495	0.36	-1.5
4,713,551	+		EFB2_04495	0.36	+1.9
4,713,551	+		EFB2_04495	0.36	-0.8
4,713,551	+		EFB2_04495	0.36	-0.4
4,713,551	+		EFB2_04495	0.36	+0.8
4,713,552	-		EFB2_04495	0.36	-0.0
4,713,552	-		EFB2_04495	0.36	+0.3
4,713,552	-		EFB2_04495	0.36	-3.3
4,713,552	-		EFB2_04495	0.36	+0.5
4,713,580	+		EFB2_04495	0.38	-0.0
4,713,580	+		EFB2_04495	0.38	+0.8
4,713,580	+		EFB2_04495	0.38	+0.2
4,713,602	+		EFB2_04495	0.39	-3.0
4,713,602	+		EFB2_04495	0.39	-2.7
4,713,602	+		EFB2_04495	0.39	+2.6
4,713,602	+		EFB2_04495	0.39	+0.4
4,713,602	+		EFB2_04495	0.39	-1.8
4,713,602	+		EFB2_04495	0.39	+0.2
4,713,602	+		EFB2_04495	0.39	-3.7
4,713,603	-		EFB2_04495	0.39	+0.4
4,713,603	-		EFB2_04495	0.39	+0.2
4,713,603	-		EFB2_04495	0.39	-0.2
4,713,603	-		EFB2_04495	0.39	+0.4
4,713,603	-		EFB2_04495	0.39	+0.0
4,713,603	-		EFB2_04495	0.39	-2.3
4,713,604	+		EFB2_04495	0.39	-0.1
4,713,604	+		EFB2_04495	0.39	+0.4
4,713,604	+		EFB2_04495	0.39	+0.2
4,713,604	+		EFB2_04495	0.39	-0.0
4,713,604	+		EFB2_04495	0.39	-0.5
4,713,604	+		EFB2_04495	0.39	-3.6
4,713,604	+		EFB2_04495	0.39	-0.3
4,713,604	+		EFB2_04495	0.39	+0.6
4,713,604	+		EFB2_04495	0.39	+0.8
4,713,604	+		EFB2_04495	0.39	+0.2
4,713,605	-		EFB2_04495	0.39	+0.3
4,713,605	-		EFB2_04495	0.39	-3.0
4,713,605	-		EFB2_04495	0.39	+0.4
4,713,605	-		EFB2_04495	0.39	-1.9
4,713,605	-		EFB2_04495	0.39	+0.0
4,713,605	-		EFB2_04495	0.39	+1.9
4,713,605	-		EFB2_04495	0.39	+0.3
4,713,605	-		EFB2_04495	0.39	-1.0
4,713,605	-		EFB2_04495	0.39	-1.7
4,713,605	-		EFB2_04495	0.39	-0.4
4,713,605	-		EFB2_04495	0.39	+1.0
4,713,605	-		EFB2_04495	0.39	-1.0
4,713,605	-		EFB2_04495	0.39	+0.2
4,713,605	-		EFB2_04495	0.39	+1.4
4,713,605	-		EFB2_04495	0.39	+1.6
4,713,613	+		EFB2_04495	0.40	-0.9
4,713,613	+		EFB2_04495	0.40	+0.8
4,713,613	+		EFB2_04495	0.40	+0.5
4,713,613	+		EFB2_04495	0.40	-0.7
4,713,614	-		EFB2_04495	0.40	-1.0
4,713,614	-		EFB2_04495	0.40	+1.3
4,713,634	+		EFB2_04495	0.41	-0.6
4,713,634	+		EFB2_04495	0.41	+0.1
4,713,634	+		EFB2_04495	0.41	+0.7
4,713,635	-		EFB2_04495	0.41	+0.3
4,713,635	-		EFB2_04495	0.41	-0.9
4,713,647	+		EFB2_04495	0.42	-2.8
4,713,647	+		EFB2_04495	0.42	-1.1
4,713,648	-		EFB2_04495	0.42	+1.9
4,713,648	-		EFB2_04495	0.42	+0.4
4,713,649	+		EFB2_04495	0.42	-0.7
4,713,649	+		EFB2_04495	0.42	+0.2
4,713,649	+		EFB2_04495	0.42	+0.1
4,713,649	+		EFB2_04495	0.42	+0.4
4,713,649	+		EFB2_04495	0.42	+0.7
4,713,649	+		EFB2_04495	0.42	+1.0
4,713,650	-		EFB2_04495	0.42	+0.9
4,713,650	-		EFB2_04495	0.42	-1.7
4,713,650	-		EFB2_04495	0.42	-1.6
4,713,650	-		EFB2_04495	0.42	+0.7
4,713,729	+		EFB2_04495	0.47	+1.0
4,713,730	-		EFB2_04495	0.47	+0.3
4,713,730	-		EFB2_04495	0.47	+1.5
4,713,754	+		EFB2_04495	0.49	-0.0
4,713,755	-		EFB2_04495	0.49	-1.3
4,713,793	+		EFB2_04495	0.51	-2.3
4,713,847	+		EFB2_04495	0.55	-0.2
4,713,847	+		EFB2_04495	0.55	+0.6
4,713,856	+		EFB2_04495	0.56	+1.3
4,713,856	+		EFB2_04495	0.56	-2.3
4,713,856	+		EFB2_04495	0.56	-2.6
4,713,856	+		EFB2_04495	0.56	+0.4
4,713,856	+		EFB2_04495	0.56	-0.1
4,713,856	+		EFB2_04495	0.56	-0.4
4,713,856	+		EFB2_04495	0.56	-0.2
4,713,856	+		EFB2_04495	0.56	+0.1
4,713,856	+		EFB2_04495	0.56	+0.5
4,713,857	-		EFB2_04495	0.56	+0.7
4,713,857	-		EFB2_04495	0.56	-0.8
4,713,857	-		EFB2_04495	0.56	+1.2
4,713,857	-		EFB2_04495	0.56	-0.2
4,713,857	-		EFB2_04495	0.56	-0.4
4,713,857	-		EFB2_04495	0.56	-1.0
4,713,857	-		EFB2_04495	0.56	+0.2
4,713,876	+		EFB2_04495	0.57	-0.3
4,713,876	+		EFB2_04495	0.57	+0.2
4,713,877	-		EFB2_04495	0.57	-0.6
4,713,877	-		EFB2_04495	0.57	-0.6
4,713,877	-		EFB2_04495	0.57	+0.5
4,713,877	-		EFB2_04495	0.57	-0.2
4,713,879	+		EFB2_04495	0.57	+1.6
4,713,879	+		EFB2_04495	0.57	-3.3
4,713,879	+		EFB2_04495	0.57	-0.2
4,713,879	+		EFB2_04495	0.57	+0.4
4,713,880	-		EFB2_04495	0.57	-2.8
4,713,880	-		EFB2_04495	0.57	+1.4
4,713,910	+		EFB2_04495	0.59	-1.2
4,713,910	+		EFB2_04495	0.59	+0.2
4,713,910	+		EFB2_04495	0.59	+0.6
4,713,910	+		EFB2_04495	0.59	-1.7
4,713,910	+		EFB2_04495	0.59	-1.3
4,713,910	+		EFB2_04495	0.59	+1.0
4,713,910	+		EFB2_04495	0.59	+0.9
4,713,910	+		EFB2_04495	0.59	-0.7
4,713,910	+		EFB2_04495	0.59	-4.5
4,713,910	+		EFB2_04495	0.59	+0.3
4,713,910	+		EFB2_04495	0.59	-0.3
4,713,910	+		EFB2_04495	0.59	-1.1
4,713,910	+		EFB2_04495	0.59	-0.4
4,713,910	+		EFB2_04495	0.59	+0.3
4,713,910	+		EFB2_04495	0.59	+1.1
4,713,910	+		EFB2_04495	0.59	-0.0
4,713,910	+		EFB2_04495	0.59	+0.2
4,713,911	-		EFB2_04495	0.59	+0.2
4,713,911	-		EFB2_04495	0.59	+0.6
4,713,911	-		EFB2_04495	0.59	+1.9
4,713,911	-		EFB2_04495	0.59	+0.8
4,713,911	-		EFB2_04495	0.59	-0.4
4,713,911	-		EFB2_04495	0.59	-1.0
4,713,911	-		EFB2_04495	0.59	+1.0
4,713,911	-		EFB2_04495	0.59	+0.4
4,713,943	+		EFB2_04495	0.61	-2.8
4,713,943	+		EFB2_04495	0.61	-1.0
4,713,944	-		EFB2_04495	0.61	-2.0
4,713,970	+		EFB2_04495	0.63	+0.4
4,713,982	+		EFB2_04495	0.64	+0.4
4,713,982	+		EFB2_04495	0.64	-0.5
4,713,982	+		EFB2_04495	0.64	-0.6
4,713,982	+		EFB2_04495	0.64	+0.1
4,713,982	+		EFB2_04495	0.64	-1.5
4,713,982	+		EFB2_04495	0.64	+0.3
4,713,982	+		EFB2_04495	0.64	-1.8
4,713,982	+		EFB2_04495	0.64	-2.6
4,713,982	+		EFB2_04495	0.64	-0.3
4,713,982	+		EFB2_04495	0.64	+0.1
4,713,982	+		EFB2_04495	0.64	-0.0
4,713,982	+		EFB2_04495	0.64	-0.7
4,713,982	+		EFB2_04495	0.64	-2.3
4,713,982	+		EFB2_04495	0.64	-0.0
4,713,983	-		EFB2_04495	0.64	-0.8
4,713,983	-		EFB2_04495	0.64	-0.7
4,713,983	-		EFB2_04495	0.64	-2.4
4,713,983	-		EFB2_04495	0.64	-0.5
4,713,983	-		EFB2_04495	0.64	+0.5
4,713,983	-		EFB2_04495	0.64	-1.6
4,713,983	-		EFB2_04495	0.64	-0.9
4,713,983	-		EFB2_04495	0.64	-1.1
4,713,983	-		EFB2_04495	0.64	+0.1
4,713,983	-		EFB2_04495	0.64	+1.7
4,713,983	-		EFB2_04495	0.64	-0.1
4,713,983	-		EFB2_04495	0.64	+0.2
4,713,983	-		EFB2_04495	0.64	+0.2
4,713,983	-		EFB2_04495	0.64	+0.2
4,713,983	-		EFB2_04495	0.64	+1.2
4,714,028	+		EFB2_04495	0.67	+0.1
4,714,028	+		EFB2_04495	0.67	-0.9
4,714,028	+		EFB2_04495	0.67	-0.6
4,714,028	+		EFB2_04495	0.67	+2.7
4,714,028	+		EFB2_04495	0.67	+0.5
4,714,028	+		EFB2_04495	0.67	-0.7
4,714,028	+		EFB2_04495	0.67	+0.0
4,714,028	+		EFB2_04495	0.67	-0.5
4,714,028	+		EFB2_04495	0.67	+0.4
4,714,028	+		EFB2_04495	0.67	+0.4
4,714,028	+		EFB2_04495	0.67	-0.2
4,714,028	+		EFB2_04495	0.67	-0.8
4,714,028	+		EFB2_04495	0.67	+0.5
4,714,028	+		EFB2_04495	0.67	-0.4
4,714,028	+		EFB2_04495	0.67	-1.1
4,714,028	+		EFB2_04495	0.67	-0.1
4,714,028	+		EFB2_04495	0.67	+1.1
4,714,028	+		EFB2_04495	0.67	-0.9
4,714,028	+		EFB2_04495	0.67	-1.5
4,714,028	+		EFB2_04495	0.67	+1.4
4,714,028	+		EFB2_04495	0.67	+1.9
4,714,028	+		EFB2_04495	0.67	-0.3
4,714,028	+		EFB2_04495	0.67	+1.5
4,714,028	+		EFB2_04495	0.67	-0.2
4,714,028	+		EFB2_04495	0.67	-0.4
4,714,028	+		EFB2_04495	0.67	-0.2
4,714,028	+		EFB2_04495	0.67	-0.2
4,714,028	+		EFB2_04495	0.67	+1.3
4,714,028	+		EFB2_04495	0.67	+0.3
4,714,028	+		EFB2_04495	0.67	+1.5
4,714,028	+		EFB2_04495	0.67	-1.5
4,714,028	+		EFB2_04495	0.67	+0.4
4,714,028	+		EFB2_04495	0.67	+0.2
4,714,028	+		EFB2_04495	0.67	-1.8
4,714,029	-		EFB2_04495	0.67	-0.5
4,714,029	-		EFB2_04495	0.67	+0.8
4,714,029	-		EFB2_04495	0.67	-1.4
4,714,029	-		EFB2_04495	0.67	-2.2
4,714,029	-		EFB2_04495	0.67	+0.6
4,714,029	-		EFB2_04495	0.67	+0.2
4,714,029	-		EFB2_04495	0.67	-2.3
4,714,029	-		EFB2_04495	0.67	-1.5
4,714,029	-		EFB2_04495	0.67	-1.1
4,714,029	-		EFB2_04495	0.67	+0.7
4,714,029	-		EFB2_04495	0.67	+1.0
4,714,029	-		EFB2_04495	0.67	+1.3
4,714,029	-		EFB2_04495	0.67	-0.8
4,714,029	-		EFB2_04495	0.67	+0.8
4,714,029	-		EFB2_04495	0.67	+1.6
4,714,029	-		EFB2_04495	0.67	-0.3
4,714,029	-		EFB2_04495	0.67	+0.8
4,714,029	-		EFB2_04495	0.67	-1.3
4,714,029	-		EFB2_04495	0.67	-2.9
4,714,029	-		EFB2_04495	0.67	-0.3
4,714,029	-		EFB2_04495	0.67	+0.4
4,714,029	-		EFB2_04495	0.67	-0.2
4,714,029	-		EFB2_04495	0.67	+0.9
4,714,029	-		EFB2_04495	0.67	-1.7
4,714,029	-		EFB2_04495	0.67	+1.3
4,714,029	-		EFB2_04495	0.67	+0.1
4,714,029	-		EFB2_04495	0.67	+0.5
4,714,029	-		EFB2_04495	0.67	-0.1
4,714,029	-		EFB2_04495	0.67	+0.5
4,714,029	-		EFB2_04495	0.67	-0.6
4,714,029	-		EFB2_04495	0.67	+1.9
4,714,029	-		EFB2_04495	0.67	-1.4
4,714,029	-		EFB2_04495	0.67	+1.2
4,714,029	-		EFB2_04495	0.67	-0.8
4,714,029	-		EFB2_04495	0.67	+0.7
4,714,089	+		EFB2_04495	0.71	-0.2
4,714,089	+		EFB2_04495	0.71	-0.2
4,714,089	+		EFB2_04495	0.71	-1.1
4,714,089	+		EFB2_04495	0.71	+0.8
4,714,089	+		EFB2_04495	0.71	-1.7
4,714,089	+		EFB2_04495	0.71	-0.2
4,714,089	+		EFB2_04495	0.71	+0.2
4,714,089	+		EFB2_04495	0.71	+1.9
4,714,089	+		EFB2_04495	0.71	+1.5
4,714,089	+		EFB2_04495	0.71	+0.3
4,714,089	+		EFB2_04495	0.71	+0.5
4,714,089	+		EFB2_04495	0.71	+0.5
4,714,089	+		EFB2_04495	0.71	+1.9
4,714,089	+		EFB2_04495	0.71	-1.0
4,714,089	+		EFB2_04495	0.71	+1.0
4,714,089	+		EFB2_04495	0.71	-0.0
4,714,089	+		EFB2_04495	0.71	-0.8
4,714,089	+		EFB2_04495	0.71	-0.8
4,714,089	+		EFB2_04495	0.71	+0.1
4,714,089	+		EFB2_04495	0.71	+1.9
4,714,089	+		EFB2_04495	0.71	+1.1
4,714,089	+		EFB2_04495	0.71	-0.4
4,714,089	+		EFB2_04495	0.71	+0.8
4,714,089	+		EFB2_04495	0.71	+0.4
4,714,089	+		EFB2_04495	0.71	-1.1
4,714,089	+		EFB2_04495	0.71	+0.3
4,714,089	+		EFB2_04495	0.71	-0.1
4,714,089	+		EFB2_04495	0.71	+0.6
4,714,089	+		EFB2_04495	0.71	-1.9
4,714,089	+		EFB2_04495	0.71	-3.6
4,714,089	+		EFB2_04495	0.71	+2.2
4,714,089	+		EFB2_04495	0.71	+1.2
4,714,089	+		EFB2_04495	0.71	+1.0
4,714,089	+		EFB2_04495	0.71	+0.8
4,714,089	+		EFB2_04495	0.71	+3.0
4,714,089	+		EFB2_04495	0.71	-0.4
4,714,089	+		EFB2_04495	0.71	-0.2
4,714,089	+		EFB2_04495	0.71	-0.0
4,714,089	+		EFB2_04495	0.71	-1.0
4,714,089	+		EFB2_04495	0.71	+0.3
4,714,090	-		EFB2_04495	0.71	+0.9
4,714,090	-		EFB2_04495	0.71	-1.0
4,714,090	-		EFB2_04495	0.71	+0.4
4,714,090	-		EFB2_04495	0.71	+0.7
4,714,090	-		EFB2_04495	0.71	+1.5
4,714,090	-		EFB2_04495	0.71	+1.3
4,714,090	-		EFB2_04495	0.71	-0.8
4,714,090	-		EFB2_04495	0.71	-1.7
4,714,090	-		EFB2_04495	0.71	-0.5
4,714,090	-		EFB2_04495	0.71	+0.8
4,714,090	-		EFB2_04495	0.71	+1.5
4,714,090	-		EFB2_04495	0.71	+0.2
4,714,090	-		EFB2_04495	0.71	-0.2
4,714,090	-		EFB2_04495	0.71	+0.7
4,714,090	-		EFB2_04495	0.71	+0.5
4,714,090	-		EFB2_04495	0.71	+1.3
4,714,090	-		EFB2_04495	0.71	-0.2
4,714,090	-		EFB2_04495	0.71	+0.8
4,714,090	-		EFB2_04495	0.71	+0.5
4,714,090	-		EFB2_04495	0.71	+1.7
4,714,090	-		EFB2_04495	0.71	+1.3
4,714,090	-		EFB2_04495	0.71	-0.4
4,714,090	-		EFB2_04495	0.71	-0.2
4,714,090	-		EFB2_04495	0.71	+1.9
4,714,090	-		EFB2_04495	0.71	-2.8
4,714,090	-		EFB2_04495	0.71	+0.5
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