Strain Fitness in Bacteroides ovatus ATCC 8483 around BACOVA_00204
Experiment: polygalacturonic 2.5 mg/mL (C)
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | polygalacturonic 2.5 mg/mL (C) |
---|---|---|---|---|---|
remove | |||||
21,694 | + | -0.5 | |||
21,695 | - | -0.5 | |||
21,721 | + | -1.0 | |||
21,743 | - | -2.0 | |||
21,771 | + | -0.3 | |||
21,783 | - | -0.9 | |||
21,786 | + | +0.9 | |||
21,786 | + | +0.4 | |||
21,786 | + | +0.3 | |||
21,787 | - | -0.5 | |||
21,810 | + | +0.1 | |||
21,835 | + | -0.0 | |||
21,835 | + | -0.0 | |||
21,836 | - | -2.2 | |||
21,836 | - | +0.4 | |||
21,839 | - | -0.2 | |||
21,849 | + | +1.2 | |||
21,984 | - | BACOVA_00206 | 0.12 | -0.9 | |
22,033 | - | BACOVA_00206 | 0.15 | -1.1 | |
22,064 | + | BACOVA_00206 | 0.17 | -0.5 | |
22,064 | + | BACOVA_00206 | 0.17 | -0.2 | |
22,077 | + | BACOVA_00206 | 0.18 | +0.7 | |
22,096 | + | BACOVA_00206 | 0.19 | +0.1 | |
22,125 | - | BACOVA_00206 | 0.21 | -0.3 | |
22,164 | + | BACOVA_00206 | 0.23 | +0.5 | |
22,168 | + | BACOVA_00206 | 0.23 | -0.9 | |
22,199 | + | BACOVA_00206 | 0.25 | +0.4 | |
22,199 | + | BACOVA_00206 | 0.25 | -0.2 | |
22,199 | + | BACOVA_00206 | 0.25 | -1.2 | |
22,210 | + | BACOVA_00206 | 0.26 | -0.8 | |
22,211 | - | BACOVA_00206 | 0.26 | -0.3 | |
22,215 | + | BACOVA_00206 | 0.26 | -0.7 | |
22,218 | - | BACOVA_00206 | 0.27 | -0.0 | |
22,227 | + | BACOVA_00206 | 0.27 | -1.0 | |
22,266 | + | BACOVA_00206 | 0.30 | +0.5 |
Or see this region's nucleotide sequence