Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_03004

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_03002 and MPMX26_03003 are separated by 110 nucleotidesMPMX26_03003 and MPMX26_03004 are separated by 6 nucleotidesMPMX26_03004 and MPMX26_03005 are separated by 40 nucleotidesMPMX26_03005 and MPMX26_03006 are separated by 100 nucleotides MPMX26_03002: MPMX26_03002 - HTH-type transcriptional regulator DmlR, at 3,116,331 to 3,117,239 _03002 MPMX26_03003: MPMX26_03003 - 2,5-diketo-D-gluconic acid reductase B, at 3,117,350 to 3,118,153 _03003 MPMX26_03004: MPMX26_03004 - Inner membrane transport protein YdhP, at 3,118,160 to 3,119,326 _03004 MPMX26_03005: MPMX26_03005 - hypothetical protein, at 3,119,367 to 3,119,987 _03005 MPMX26_03006: MPMX26_03006 - 4-hydroxy-tetrahydrodipicolinate reductase, at 3,120,088 to 3,120,909 _03006 Position (kb) 3118 3119 3120Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 3117.172 kb on - strandat 3117.172 kb on - strandat 3117.172 kb on - strandat 3117.172 kb on - strandat 3117.172 kb on - strandat 3117.172 kb on - strandat 3117.172 kb on - strandat 3117.172 kb on - strandat 3117.195 kb on - strandat 3117.200 kb on - strandat 3117.200 kb on - strandat 3117.200 kb on - strandat 3117.202 kb on - strandat 3117.202 kb on - strandat 3117.202 kb on - strandat 3117.431 kb on + strand, within MPMX26_03003at 3117.431 kb on + strand, within MPMX26_03003at 3117.431 kb on + strand, within MPMX26_03003at 3117.455 kb on + strand, within MPMX26_03003at 3117.566 kb on + strand, within MPMX26_03003at 3117.584 kb on + strand, within MPMX26_03003at 3117.589 kb on + strand, within MPMX26_03003at 3117.604 kb on + strand, within MPMX26_03003at 3117.612 kb on - strand, within MPMX26_03003at 3117.658 kb on + strand, within MPMX26_03003at 3117.658 kb on + strand, within MPMX26_03003at 3117.658 kb on + strand, within MPMX26_03003at 3117.658 kb on + strand, within MPMX26_03003at 3117.658 kb on + strand, within MPMX26_03003at 3117.658 kb on + strand, within MPMX26_03003at 3117.666 kb on - strand, within MPMX26_03003at 3117.666 kb on - strand, within MPMX26_03003at 3117.666 kb on - strand, within MPMX26_03003at 3117.856 kb on + strand, within MPMX26_03003at 3117.864 kb on + strand, within MPMX26_03003at 3117.872 kb on - strand, within MPMX26_03003at 3117.892 kb on + strand, within MPMX26_03003at 3117.898 kb on + strand, within MPMX26_03003at 3117.915 kb on + strand, within MPMX26_03003at 3117.938 kb on + strand, within MPMX26_03003at 3117.938 kb on + strand, within MPMX26_03003at 3117.938 kb on + strand, within MPMX26_03003at 3117.938 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.973 kb on + strand, within MPMX26_03003at 3117.978 kb on + strand, within MPMX26_03003at 3117.978 kb on + strand, within MPMX26_03003at 3117.979 kb on + strand, within MPMX26_03003at 3117.981 kb on - strand, within MPMX26_03003at 3117.981 kb on - strand, within MPMX26_03003at 3117.983 kb on + strand, within MPMX26_03003at 3117.986 kb on - strand, within MPMX26_03003at 3118.028 kb on + strand, within MPMX26_03003at 3118.122 kb on + strandat 3118.132 kb on + strandat 3118.232 kb on + strandat 3118.322 kb on - strand, within MPMX26_03004at 3118.452 kb on + strand, within MPMX26_03004at 3118.452 kb on + strand, within MPMX26_03004at 3118.460 kb on - strand, within MPMX26_03004at 3118.470 kb on + strand, within MPMX26_03004at 3118.478 kb on - strand, within MPMX26_03004at 3118.500 kb on + strand, within MPMX26_03004at 3118.518 kb on + strand, within MPMX26_03004at 3118.577 kb on + strand, within MPMX26_03004at 3118.659 kb on + strand, within MPMX26_03004at 3118.659 kb on + strand, within MPMX26_03004at 3118.667 kb on - strand, within MPMX26_03004at 3118.694 kb on + strand, within MPMX26_03004at 3118.706 kb on + strand, within MPMX26_03004at 3118.715 kb on + strand, within MPMX26_03004at 3118.898 kb on + strand, within MPMX26_03004at 3118.997 kb on + strand, within MPMX26_03004at 3119.104 kb on + strand, within MPMX26_03004at 3119.184 kb on + strand, within MPMX26_03004at 3119.186 kb on + strand, within MPMX26_03004at 3119.231 kb on + strandat 3119.249 kb on + strandat 3119.249 kb on + strandat 3119.249 kb on + strandat 3119.249 kb on + strandat 3119.302 kb on + strandat 3119.847 kb on + strand, within MPMX26_03005

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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3,117,172 - -0.3
3,117,172 - -0.4
3,117,172 - +0.2
3,117,172 - -0.4
3,117,172 - -0.0
3,117,172 - -0.3
3,117,172 - -0.8
3,117,172 - +0.5
3,117,195 - -0.3
3,117,200 - -0.1
3,117,200 - -0.1
3,117,200 - -0.5
3,117,202 - +0.3
3,117,202 - -0.2
3,117,202 - -0.8
3,117,431 + MPMX26_03003 0.10 -0.9
3,117,431 + MPMX26_03003 0.10 +0.8
3,117,431 + MPMX26_03003 0.10 +0.5
3,117,455 + MPMX26_03003 0.13 +0.1
3,117,566 + MPMX26_03003 0.27 +0.2
3,117,584 + MPMX26_03003 0.29 +1.3
3,117,589 + MPMX26_03003 0.30 +1.2
3,117,604 + MPMX26_03003 0.32 +0.6
3,117,612 - MPMX26_03003 0.33 +0.9
3,117,658 + MPMX26_03003 0.38 +1.5
3,117,658 + MPMX26_03003 0.38 +0.2
3,117,658 + MPMX26_03003 0.38 -0.3
3,117,658 + MPMX26_03003 0.38 -1.6
3,117,658 + MPMX26_03003 0.38 +1.3
3,117,658 + MPMX26_03003 0.38 +1.3
3,117,666 - MPMX26_03003 0.39 +1.6
3,117,666 - MPMX26_03003 0.39 +0.1
3,117,666 - MPMX26_03003 0.39 +0.7
3,117,856 + MPMX26_03003 0.63 +1.4
3,117,864 + MPMX26_03003 0.64 -0.4
3,117,872 - MPMX26_03003 0.65 +1.6
3,117,892 + MPMX26_03003 0.67 -0.9
3,117,898 + MPMX26_03003 0.68 -0.3
3,117,915 + MPMX26_03003 0.70 -0.8
3,117,938 + MPMX26_03003 0.73 -0.1
3,117,938 + MPMX26_03003 0.73 +0.2
3,117,938 + MPMX26_03003 0.73 -0.9
3,117,938 + MPMX26_03003 0.73 +0.9
3,117,973 + MPMX26_03003 0.77 -0.2
3,117,973 + MPMX26_03003 0.77 -0.2
3,117,973 + MPMX26_03003 0.77 +0.7
3,117,973 + MPMX26_03003 0.77 +0.6
3,117,973 + MPMX26_03003 0.77 -0.3
3,117,973 + MPMX26_03003 0.77 -0.9
3,117,973 + MPMX26_03003 0.77 +0.1
3,117,973 + MPMX26_03003 0.77 -1.0
3,117,973 + MPMX26_03003 0.77 -0.5
3,117,978 + MPMX26_03003 0.78 -0.8
3,117,978 + MPMX26_03003 0.78 +1.0
3,117,979 + MPMX26_03003 0.78 +0.8
3,117,981 - MPMX26_03003 0.78 +0.7
3,117,981 - MPMX26_03003 0.78 -0.8
3,117,983 + MPMX26_03003 0.79 -0.1
3,117,986 - MPMX26_03003 0.79 +1.7
3,118,028 + MPMX26_03003 0.84 +1.3
3,118,122 + -1.6
3,118,132 + -1.2
3,118,232 + +0.1
3,118,322 - MPMX26_03004 0.14 -0.1
3,118,452 + MPMX26_03004 0.25 -0.2
3,118,452 + MPMX26_03004 0.25 -3.0
3,118,460 - MPMX26_03004 0.26 -1.9
3,118,470 + MPMX26_03004 0.27 +0.7
3,118,478 - MPMX26_03004 0.27 -1.2
3,118,500 + MPMX26_03004 0.29 -0.1
3,118,518 + MPMX26_03004 0.31 -1.1
3,118,577 + MPMX26_03004 0.36 +1.6
3,118,659 + MPMX26_03004 0.43 -0.2
3,118,659 + MPMX26_03004 0.43 -0.7
3,118,667 - MPMX26_03004 0.43 +1.8
3,118,694 + MPMX26_03004 0.46 +0.3
3,118,706 + MPMX26_03004 0.47 +0.3
3,118,715 + MPMX26_03004 0.48 +1.0
3,118,898 + MPMX26_03004 0.63 +0.9
3,118,997 + MPMX26_03004 0.72 -1.1
3,119,104 + MPMX26_03004 0.81 +0.6
3,119,184 + MPMX26_03004 0.88 -0.5
3,119,186 + MPMX26_03004 0.88 +0.7
3,119,231 + -1.1
3,119,249 + -0.1
3,119,249 + -0.9
3,119,249 + +1.1
3,119,249 + +1.9
3,119,302 + +0.5
3,119,847 + MPMX26_03005 0.77 +0.8

Or see this region's nucleotide sequence