Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_03000 and MPMX26_03001 are separated by 89 nucleotides MPMX26_03001 and MPMX26_03002 overlap by 22 nucleotides MPMX26_03002 and MPMX26_03003 are separated by 110 nucleotides MPMX26_03003 and MPMX26_03004 are separated by 6 nucleotides
MPMX26_03000: MPMX26_03000 - HTH-type transcriptional regulator NorG, at 3,114,461 to 3,115,888
_03000
MPMX26_03001: MPMX26_03001 - hypothetical protein, at 3,115,978 to 3,116,352
_03001
MPMX26_03002: MPMX26_03002 - HTH-type transcriptional regulator DmlR, at 3,116,331 to 3,117,239
_03002
MPMX26_03003: MPMX26_03003 - 2,5-diketo-D-gluconic acid reductase B, at 3,117,350 to 3,118,153
_03003
MPMX26_03004: MPMX26_03004 - Inner membrane transport protein YdhP, at 3,118,160 to 3,119,326
_03004
Position (kb)
3116
3117
3118 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3115.358 kb on - strand, within MPMX26_03000 at 3115.358 kb on - strand, within MPMX26_03000 at 3115.420 kb on - strand, within MPMX26_03000 at 3115.519 kb on - strand, within MPMX26_03000 at 3115.535 kb on - strand, within MPMX26_03000 at 3115.562 kb on - strand, within MPMX26_03000 at 3115.567 kb on - strand, within MPMX26_03000 at 3115.769 kb on - strand at 3115.811 kb on - strand at 3116.150 kb on - strand, within MPMX26_03001 at 3116.193 kb on + strand, within MPMX26_03001 at 3116.211 kb on - strand, within MPMX26_03001 at 3116.237 kb on - strand, within MPMX26_03001 at 3116.242 kb on - strand, within MPMX26_03001 at 3116.242 kb on - strand, within MPMX26_03001 at 3116.242 kb on - strand, within MPMX26_03001 at 3116.242 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.284 kb on - strand, within MPMX26_03001 at 3116.294 kb on - strand, within MPMX26_03001 at 3116.308 kb on - strand, within MPMX26_03001 at 3116.318 kb on - strand at 3116.318 kb on - strand at 3116.318 kb on - strand at 3116.400 kb on - strand at 3116.401 kb on - strand at 3116.488 kb on - strand, within MPMX26_03002 at 3116.493 kb on - strand, within MPMX26_03002 at 3116.493 kb on - strand, within MPMX26_03002 at 3116.493 kb on - strand, within MPMX26_03002 at 3116.493 kb on - strand, within MPMX26_03002 at 3116.498 kb on - strand, within MPMX26_03002 at 3116.498 kb on - strand, within MPMX26_03002 at 3116.498 kb on - strand, within MPMX26_03002 at 3116.498 kb on - strand, within MPMX26_03002 at 3116.499 kb on - strand, within MPMX26_03002 at 3116.509 kb on - strand, within MPMX26_03002 at 3116.509 kb on - strand, within MPMX26_03002 at 3116.509 kb on - strand, within MPMX26_03002 at 3116.509 kb on - strand, within MPMX26_03002 at 3116.567 kb on - strand, within MPMX26_03002 at 3116.577 kb on - strand, within MPMX26_03002 at 3116.581 kb on - strand, within MPMX26_03002 at 3116.581 kb on - strand, within MPMX26_03002 at 3116.618 kb on - strand, within MPMX26_03002 at 3116.618 kb on - strand, within MPMX26_03002 at 3116.640 kb on - strand, within MPMX26_03002 at 3116.640 kb on - strand, within MPMX26_03002 at 3116.696 kb on - strand, within MPMX26_03002 at 3116.698 kb on - strand, within MPMX26_03002 at 3116.705 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.715 kb on - strand, within MPMX26_03002 at 3116.716 kb on - strand, within MPMX26_03002 at 3116.725 kb on - strand, within MPMX26_03002 at 3116.751 kb on - strand, within MPMX26_03002 at 3116.762 kb on - strand, within MPMX26_03002 at 3116.806 kb on - strand, within MPMX26_03002 at 3116.829 kb on - strand, within MPMX26_03002 at 3116.845 kb on - strand, within MPMX26_03002 at 3116.857 kb on - strand, within MPMX26_03002 at 3116.857 kb on - strand, within MPMX26_03002 at 3116.857 kb on - strand, within MPMX26_03002 at 3116.857 kb on - strand, within MPMX26_03002 at 3116.857 kb on - strand, within MPMX26_03002 at 3116.857 kb on - strand, within MPMX26_03002 at 3116.862 kb on - strand, within MPMX26_03002 at 3116.889 kb on - strand, within MPMX26_03002 at 3116.935 kb on - strand, within MPMX26_03002 at 3116.935 kb on - strand, within MPMX26_03002 at 3116.935 kb on - strand, within MPMX26_03002 at 3116.942 kb on - strand, within MPMX26_03002 at 3116.942 kb on - strand, within MPMX26_03002 at 3116.942 kb on - strand, within MPMX26_03002 at 3116.988 kb on - strand, within MPMX26_03002 at 3116.988 kb on - strand, within MPMX26_03002 at 3116.988 kb on - strand, within MPMX26_03002 at 3116.988 kb on - strand, within MPMX26_03002 at 3117.004 kb on - strand, within MPMX26_03002 at 3117.004 kb on - strand, within MPMX26_03002 at 3117.012 kb on - strand, within MPMX26_03002 at 3117.014 kb on - strand, within MPMX26_03002 at 3117.044 kb on - strand, within MPMX26_03002 at 3117.053 kb on - strand, within MPMX26_03002 at 3117.108 kb on - strand, within MPMX26_03002 at 3117.172 kb on - strand at 3117.172 kb on - strand at 3117.172 kb on - strand at 3117.172 kb on - strand at 3117.172 kb on - strand at 3117.172 kb on - strand at 3117.172 kb on - strand at 3117.172 kb on - strand at 3117.195 kb on - strand at 3117.200 kb on - strand at 3117.200 kb on - strand at 3117.200 kb on - strand at 3117.202 kb on - strand at 3117.202 kb on - strand at 3117.202 kb on - strand at 3117.431 kb on + strand, within MPMX26_03003 at 3117.431 kb on + strand, within MPMX26_03003 at 3117.431 kb on + strand, within MPMX26_03003 at 3117.455 kb on + strand, within MPMX26_03003 at 3117.566 kb on + strand, within MPMX26_03003 at 3117.584 kb on + strand, within MPMX26_03003 at 3117.589 kb on + strand, within MPMX26_03003 at 3117.604 kb on + strand, within MPMX26_03003 at 3117.612 kb on - strand, within MPMX26_03003 at 3117.658 kb on + strand, within MPMX26_03003 at 3117.658 kb on + strand, within MPMX26_03003 at 3117.658 kb on + strand, within MPMX26_03003 at 3117.658 kb on + strand, within MPMX26_03003 at 3117.658 kb on + strand, within MPMX26_03003 at 3117.658 kb on + strand, within MPMX26_03003 at 3117.666 kb on - strand, within MPMX26_03003 at 3117.666 kb on - strand, within MPMX26_03003 at 3117.666 kb on - strand, within MPMX26_03003 at 3117.856 kb on + strand, within MPMX26_03003 at 3117.864 kb on + strand, within MPMX26_03003 at 3117.872 kb on - strand, within MPMX26_03003 at 3117.892 kb on + strand, within MPMX26_03003 at 3117.898 kb on + strand, within MPMX26_03003 at 3117.915 kb on + strand, within MPMX26_03003 at 3117.938 kb on + strand, within MPMX26_03003 at 3117.938 kb on + strand, within MPMX26_03003 at 3117.938 kb on + strand, within MPMX26_03003 at 3117.938 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.973 kb on + strand, within MPMX26_03003 at 3117.978 kb on + strand, within MPMX26_03003 at 3117.978 kb on + strand, within MPMX26_03003 at 3117.979 kb on + strand, within MPMX26_03003 at 3117.981 kb on - strand, within MPMX26_03003 at 3117.981 kb on - strand, within MPMX26_03003 at 3117.983 kb on + strand, within MPMX26_03003 at 3117.986 kb on - strand, within MPMX26_03003 at 3118.028 kb on + strand, within MPMX26_03003 at 3118.122 kb on + strand at 3118.132 kb on + strand at 3118.232 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 3,115,358 - MPMX26_03000 0.63 -1.2 3,115,358 - MPMX26_03000 0.63 -1.3 3,115,420 - MPMX26_03000 0.67 -1.6 3,115,519 - MPMX26_03000 0.74 -1.1 3,115,535 - MPMX26_03000 0.75 -0.9 3,115,562 - MPMX26_03000 0.77 -0.9 3,115,567 - MPMX26_03000 0.77 -1.7 3,115,769 - -1.7 3,115,811 - -1.5 3,116,150 - MPMX26_03001 0.46 +0.5 3,116,193 + MPMX26_03001 0.57 +3.9 3,116,211 - MPMX26_03001 0.62 +0.1 3,116,237 - MPMX26_03001 0.69 -0.2 3,116,242 - MPMX26_03001 0.70 +0.3 3,116,242 - MPMX26_03001 0.70 -0.3 3,116,242 - MPMX26_03001 0.70 +0.3 3,116,242 - MPMX26_03001 0.70 -1.7 3,116,284 - MPMX26_03001 0.82 +0.3 3,116,284 - MPMX26_03001 0.82 +0.6 3,116,284 - MPMX26_03001 0.82 +0.6 3,116,284 - MPMX26_03001 0.82 -0.1 3,116,284 - MPMX26_03001 0.82 +0.1 3,116,284 - MPMX26_03001 0.82 -1.7 3,116,284 - MPMX26_03001 0.82 +1.2 3,116,284 - MPMX26_03001 0.82 +0.5 3,116,284 - MPMX26_03001 0.82 +0.2 3,116,294 - MPMX26_03001 0.84 -0.3 3,116,308 - MPMX26_03001 0.88 +0.1 3,116,318 - +1.0 3,116,318 - +0.1 3,116,318 - +0.7 3,116,400 - +0.5 3,116,401 - +1.7 3,116,488 - MPMX26_03002 0.17 +0.2 3,116,493 - MPMX26_03002 0.18 -0.8 3,116,493 - MPMX26_03002 0.18 +0.3 3,116,493 - MPMX26_03002 0.18 -0.2 3,116,493 - MPMX26_03002 0.18 -0.4 3,116,498 - MPMX26_03002 0.18 +0.1 3,116,498 - MPMX26_03002 0.18 +0.1 3,116,498 - MPMX26_03002 0.18 -0.1 3,116,498 - MPMX26_03002 0.18 +0.2 3,116,499 - MPMX26_03002 0.18 +0.4 3,116,509 - MPMX26_03002 0.20 +0.1 3,116,509 - MPMX26_03002 0.20 +0.7 3,116,509 - MPMX26_03002 0.20 -0.5 3,116,509 - MPMX26_03002 0.20 +0.2 3,116,567 - MPMX26_03002 0.26 -0.4 3,116,577 - MPMX26_03002 0.27 -0.9 3,116,581 - MPMX26_03002 0.28 -0.5 3,116,581 - MPMX26_03002 0.28 -1.1 3,116,618 - MPMX26_03002 0.32 +0.0 3,116,618 - MPMX26_03002 0.32 -0.9 3,116,640 - MPMX26_03002 0.34 -0.2 3,116,640 - MPMX26_03002 0.34 -0.3 3,116,696 - MPMX26_03002 0.40 -0.5 3,116,698 - MPMX26_03002 0.40 +0.9 3,116,705 - MPMX26_03002 0.41 -0.3 3,116,715 - MPMX26_03002 0.42 -0.9 3,116,715 - MPMX26_03002 0.42 +0.5 3,116,715 - MPMX26_03002 0.42 -0.2 3,116,715 - MPMX26_03002 0.42 -1.4 3,116,715 - MPMX26_03002 0.42 -0.3 3,116,715 - MPMX26_03002 0.42 -0.1 3,116,715 - MPMX26_03002 0.42 -0.7 3,116,715 - MPMX26_03002 0.42 -0.2 3,116,715 - MPMX26_03002 0.42 -0.8 3,116,716 - MPMX26_03002 0.42 +0.5 3,116,725 - MPMX26_03002 0.43 -1.4 3,116,751 - MPMX26_03002 0.46 +0.7 3,116,762 - MPMX26_03002 0.47 +0.2 3,116,806 - MPMX26_03002 0.52 -0.2 3,116,829 - MPMX26_03002 0.55 +0.0 3,116,845 - MPMX26_03002 0.57 -0.5 3,116,857 - MPMX26_03002 0.58 +1.3 3,116,857 - MPMX26_03002 0.58 -0.2 3,116,857 - MPMX26_03002 0.58 +0.7 3,116,857 - MPMX26_03002 0.58 -1.4 3,116,857 - MPMX26_03002 0.58 +0.1 3,116,857 - MPMX26_03002 0.58 -0.6 3,116,862 - MPMX26_03002 0.58 -2.0 3,116,889 - MPMX26_03002 0.61 -1.2 3,116,935 - MPMX26_03002 0.66 -0.3 3,116,935 - MPMX26_03002 0.66 -0.4 3,116,935 - MPMX26_03002 0.66 -1.7 3,116,942 - MPMX26_03002 0.67 -1.2 3,116,942 - MPMX26_03002 0.67 +0.0 3,116,942 - MPMX26_03002 0.67 -0.0 3,116,988 - MPMX26_03002 0.72 +0.2 3,116,988 - MPMX26_03002 0.72 -1.4 3,116,988 - MPMX26_03002 0.72 -0.9 3,116,988 - MPMX26_03002 0.72 -0.0 3,117,004 - MPMX26_03002 0.74 -1.0 3,117,004 - MPMX26_03002 0.74 -0.6 3,117,012 - MPMX26_03002 0.75 -0.4 3,117,014 - MPMX26_03002 0.75 +1.0 3,117,044 - MPMX26_03002 0.78 +0.2 3,117,053 - MPMX26_03002 0.79 -0.6 3,117,108 - MPMX26_03002 0.85 -0.3 3,117,172 - -0.3 3,117,172 - -0.4 3,117,172 - +0.2 3,117,172 - -0.4 3,117,172 - -0.0 3,117,172 - -0.3 3,117,172 - -0.8 3,117,172 - +0.5 3,117,195 - -0.3 3,117,200 - -0.1 3,117,200 - -0.1 3,117,200 - -0.5 3,117,202 - +0.3 3,117,202 - -0.2 3,117,202 - -0.8 3,117,431 + MPMX26_03003 0.10 -0.9 3,117,431 + MPMX26_03003 0.10 +0.8 3,117,431 + MPMX26_03003 0.10 +0.5 3,117,455 + MPMX26_03003 0.13 +0.1 3,117,566 + MPMX26_03003 0.27 +0.2 3,117,584 + MPMX26_03003 0.29 +1.3 3,117,589 + MPMX26_03003 0.30 +1.2 3,117,604 + MPMX26_03003 0.32 +0.6 3,117,612 - MPMX26_03003 0.33 +0.9 3,117,658 + MPMX26_03003 0.38 +1.5 3,117,658 + MPMX26_03003 0.38 +0.2 3,117,658 + MPMX26_03003 0.38 -0.3 3,117,658 + MPMX26_03003 0.38 -1.6 3,117,658 + MPMX26_03003 0.38 +1.3 3,117,658 + MPMX26_03003 0.38 +1.3 3,117,666 - MPMX26_03003 0.39 +1.6 3,117,666 - MPMX26_03003 0.39 +0.1 3,117,666 - MPMX26_03003 0.39 +0.7 3,117,856 + MPMX26_03003 0.63 +1.4 3,117,864 + MPMX26_03003 0.64 -0.4 3,117,872 - MPMX26_03003 0.65 +1.6 3,117,892 + MPMX26_03003 0.67 -0.9 3,117,898 + MPMX26_03003 0.68 -0.3 3,117,915 + MPMX26_03003 0.70 -0.8 3,117,938 + MPMX26_03003 0.73 -0.1 3,117,938 + MPMX26_03003 0.73 +0.2 3,117,938 + MPMX26_03003 0.73 -0.9 3,117,938 + MPMX26_03003 0.73 +0.9 3,117,973 + MPMX26_03003 0.77 -0.2 3,117,973 + MPMX26_03003 0.77 -0.2 3,117,973 + MPMX26_03003 0.77 +0.7 3,117,973 + MPMX26_03003 0.77 +0.6 3,117,973 + MPMX26_03003 0.77 -0.3 3,117,973 + MPMX26_03003 0.77 -0.9 3,117,973 + MPMX26_03003 0.77 +0.1 3,117,973 + MPMX26_03003 0.77 -1.0 3,117,973 + MPMX26_03003 0.77 -0.5 3,117,978 + MPMX26_03003 0.78 -0.8 3,117,978 + MPMX26_03003 0.78 +1.0 3,117,979 + MPMX26_03003 0.78 +0.8 3,117,981 - MPMX26_03003 0.78 +0.7 3,117,981 - MPMX26_03003 0.78 -0.8 3,117,983 + MPMX26_03003 0.79 -0.1 3,117,986 - MPMX26_03003 0.79 +1.7 3,118,028 + MPMX26_03003 0.84 +1.3 3,118,122 + -1.6 3,118,132 + -1.2 3,118,232 + +0.1
Or see this region's nucleotide sequence