Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02531

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02529 and MPMX26_02530 are separated by 268 nucleotidesMPMX26_02530 and MPMX26_02531 are separated by 463 nucleotidesMPMX26_02531 and MPMX26_02532 are separated by 57 nucleotides MPMX26_02529: MPMX26_02529 - hypothetical protein, at 2,617,186 to 2,617,641 _02529 MPMX26_02530: MPMX26_02530 - hypothetical protein, at 2,617,910 to 2,618,077 _02530 MPMX26_02531: MPMX26_02531 - putative multidrug resistance protein EmrY, at 2,618,541 to 2,620,178 _02531 MPMX26_02532: MPMX26_02532 - Colistin resistance protein EmrA, at 2,620,236 to 2,621,381 _02532 Position (kb) 2618 2619 2620 2621Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2617.567 kb on + strand, within MPMX26_02529at 2617.567 kb on + strand, within MPMX26_02529at 2618.413 kb on + strandat 2618.551 kb on - strandat 2618.595 kb on + strandat 2618.787 kb on + strand, within MPMX26_02531at 2619.111 kb on - strand, within MPMX26_02531at 2619.263 kb on + strand, within MPMX26_02531at 2619.288 kb on + strand, within MPMX26_02531at 2619.527 kb on + strand, within MPMX26_02531at 2619.539 kb on + strand, within MPMX26_02531at 2619.669 kb on + strand, within MPMX26_02531at 2619.674 kb on + strand, within MPMX26_02531at 2619.816 kb on + strand, within MPMX26_02531at 2619.816 kb on + strand, within MPMX26_02531at 2619.816 kb on + strand, within MPMX26_02531at 2619.816 kb on + strand, within MPMX26_02531at 2619.821 kb on + strand, within MPMX26_02531at 2619.965 kb on + strand, within MPMX26_02531at 2620.260 kb on + strandat 2620.260 kb on + strandat 2620.276 kb on + strandat 2620.482 kb on + strand, within MPMX26_02532at 2620.542 kb on + strand, within MPMX26_02532at 2620.674 kb on + strand, within MPMX26_02532at 2620.674 kb on + strand, within MPMX26_02532at 2620.674 kb on + strand, within MPMX26_02532at 2620.674 kb on + strand, within MPMX26_02532at 2620.679 kb on + strand, within MPMX26_02532at 2620.721 kb on + strand, within MPMX26_02532at 2620.721 kb on + strand, within MPMX26_02532at 2620.721 kb on + strand, within MPMX26_02532at 2620.721 kb on + strand, within MPMX26_02532at 2620.721 kb on + strand, within MPMX26_02532at 2620.721 kb on + strand, within MPMX26_02532at 2620.733 kb on + strand, within MPMX26_02532at 2620.733 kb on + strand, within MPMX26_02532at 2620.733 kb on + strand, within MPMX26_02532at 2620.733 kb on + strand, within MPMX26_02532at 2620.803 kb on + strand, within MPMX26_02532at 2620.803 kb on + strand, within MPMX26_02532at 2620.808 kb on + strand, within MPMX26_02532at 2620.808 kb on + strand, within MPMX26_02532at 2620.808 kb on + strand, within MPMX26_02532at 2620.842 kb on + strand, within MPMX26_02532at 2620.847 kb on + strand, within MPMX26_02532at 2620.847 kb on + strand, within MPMX26_02532at 2620.847 kb on + strand, within MPMX26_02532at 2620.874 kb on + strand, within MPMX26_02532at 2620.907 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.961 kb on + strand, within MPMX26_02532at 2620.962 kb on + strand, within MPMX26_02532at 2620.962 kb on + strand, within MPMX26_02532at 2620.983 kb on + strand, within MPMX26_02532at 2620.983 kb on + strand, within MPMX26_02532at 2620.983 kb on + strand, within MPMX26_02532at 2621.037 kb on + strand, within MPMX26_02532at 2621.129 kb on + strand, within MPMX26_02532

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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2,617,567 + MPMX26_02529 0.84 +0.5
2,617,567 + MPMX26_02529 0.84 +0.3
2,618,413 + +0.7
2,618,551 - +0.4
2,618,595 + +0.6
2,618,787 + MPMX26_02531 0.15 +3.3
2,619,111 - MPMX26_02531 0.35 -0.0
2,619,263 + MPMX26_02531 0.44 +0.7
2,619,288 + MPMX26_02531 0.46 -0.0
2,619,527 + MPMX26_02531 0.60 +0.9
2,619,539 + MPMX26_02531 0.61 -0.5
2,619,669 + MPMX26_02531 0.69 -1.3
2,619,674 + MPMX26_02531 0.69 +0.5
2,619,816 + MPMX26_02531 0.78 +0.8
2,619,816 + MPMX26_02531 0.78 -1.1
2,619,816 + MPMX26_02531 0.78 -0.6
2,619,816 + MPMX26_02531 0.78 -0.4
2,619,821 + MPMX26_02531 0.78 -0.6
2,619,965 + MPMX26_02531 0.87 -2.2
2,620,260 + +0.7
2,620,260 + -0.9
2,620,276 + +1.2
2,620,482 + MPMX26_02532 0.21 +1.7
2,620,542 + MPMX26_02532 0.27 -1.1
2,620,674 + MPMX26_02532 0.38 +0.9
2,620,674 + MPMX26_02532 0.38 +1.0
2,620,674 + MPMX26_02532 0.38 -0.8
2,620,674 + MPMX26_02532 0.38 -0.4
2,620,679 + MPMX26_02532 0.39 +0.9
2,620,721 + MPMX26_02532 0.42 -0.5
2,620,721 + MPMX26_02532 0.42 -2.0
2,620,721 + MPMX26_02532 0.42 -0.0
2,620,721 + MPMX26_02532 0.42 +1.0
2,620,721 + MPMX26_02532 0.42 +0.1
2,620,721 + MPMX26_02532 0.42 -1.4
2,620,733 + MPMX26_02532 0.43 -0.3
2,620,733 + MPMX26_02532 0.43 +1.2
2,620,733 + MPMX26_02532 0.43 +1.1
2,620,733 + MPMX26_02532 0.43 +1.5
2,620,803 + MPMX26_02532 0.49 -1.0
2,620,803 + MPMX26_02532 0.49 +1.8
2,620,808 + MPMX26_02532 0.50 -2.1
2,620,808 + MPMX26_02532 0.50 -0.1
2,620,808 + MPMX26_02532 0.50 +0.5
2,620,842 + MPMX26_02532 0.53 +0.1
2,620,847 + MPMX26_02532 0.53 -0.9
2,620,847 + MPMX26_02532 0.53 +0.4
2,620,847 + MPMX26_02532 0.53 +0.5
2,620,874 + MPMX26_02532 0.56 -0.3
2,620,907 + MPMX26_02532 0.59 +0.9
2,620,961 + MPMX26_02532 0.63 +0.7
2,620,961 + MPMX26_02532 0.63 -1.3
2,620,961 + MPMX26_02532 0.63 -0.4
2,620,961 + MPMX26_02532 0.63 +0.5
2,620,961 + MPMX26_02532 0.63 -0.6
2,620,961 + MPMX26_02532 0.63 -0.9
2,620,961 + MPMX26_02532 0.63 -0.4
2,620,961 + MPMX26_02532 0.63 +0.3
2,620,961 + MPMX26_02532 0.63 -0.2
2,620,962 + MPMX26_02532 0.63 -0.0
2,620,962 + MPMX26_02532 0.63 -1.4
2,620,983 + MPMX26_02532 0.65 -0.4
2,620,983 + MPMX26_02532 0.65 -0.1
2,620,983 + MPMX26_02532 0.65 +0.1
2,621,037 + MPMX26_02532 0.70 -0.2
2,621,129 + MPMX26_02532 0.78 -0.9

Or see this region's nucleotide sequence