Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02513 and MPMX26_02514 are separated by 338 nucleotides MPMX26_02514 and MPMX26_02515 are separated by 61 nucleotides MPMX26_02515 and MPMX26_02516 are separated by 12 nucleotides
MPMX26_02513: MPMX26_02513 - Alkaline phosphatase synthesis transcriptional regulatory protein PhoP, at 2,597,000 to 2,597,383
_02513
MPMX26_02514: MPMX26_02514 - hypothetical protein, at 2,597,722 to 2,598,303
_02514
MPMX26_02515: MPMX26_02515 - Multidrug resistance protein MdtA, at 2,598,365 to 2,599,492
_02515
MPMX26_02516: MPMX26_02516 - Multidrug resistance protein MdtC, at 2,599,505 to 2,602,609
_02516
Position (kb)
2598
2599
2600 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2597.749 kb on + strand at 2597.778 kb on + strand at 2597.788 kb on + strand, within MPMX26_02514 at 2597.788 kb on + strand, within MPMX26_02514 at 2597.790 kb on + strand, within MPMX26_02514 at 2597.837 kb on + strand, within MPMX26_02514 at 2597.910 kb on + strand, within MPMX26_02514 at 2597.910 kb on + strand, within MPMX26_02514 at 2597.910 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2597.956 kb on + strand, within MPMX26_02514 at 2598.019 kb on + strand, within MPMX26_02514 at 2598.019 kb on + strand, within MPMX26_02514 at 2598.024 kb on + strand, within MPMX26_02514 at 2598.024 kb on + strand, within MPMX26_02514 at 2598.024 kb on + strand, within MPMX26_02514 at 2598.024 kb on + strand, within MPMX26_02514 at 2598.108 kb on + strand, within MPMX26_02514 at 2598.148 kb on + strand, within MPMX26_02514 at 2598.154 kb on + strand, within MPMX26_02514 at 2598.253 kb on + strand at 2598.253 kb on + strand at 2598.253 kb on + strand at 2598.394 kb on + strand at 2598.394 kb on + strand at 2598.394 kb on + strand at 2598.417 kb on + strand at 2598.426 kb on + strand at 2598.427 kb on + strand at 2598.436 kb on + strand at 2598.442 kb on + strand at 2598.452 kb on + strand at 2598.463 kb on + strand at 2598.547 kb on + strand, within MPMX26_02515 at 2598.560 kb on + strand, within MPMX26_02515 at 2598.573 kb on + strand, within MPMX26_02515 at 2598.581 kb on + strand, within MPMX26_02515 at 2598.647 kb on + strand, within MPMX26_02515 at 2598.665 kb on + strand, within MPMX26_02515 at 2598.665 kb on + strand, within MPMX26_02515 at 2598.682 kb on + strand, within MPMX26_02515 at 2598.736 kb on + strand, within MPMX26_02515 at 2598.823 kb on + strand, within MPMX26_02515 at 2598.846 kb on + strand, within MPMX26_02515 at 2598.870 kb on + strand, within MPMX26_02515 at 2598.875 kb on + strand, within MPMX26_02515 at 2598.884 kb on + strand, within MPMX26_02515 at 2598.920 kb on + strand, within MPMX26_02515 at 2598.920 kb on + strand, within MPMX26_02515 at 2598.941 kb on + strand, within MPMX26_02515 at 2598.970 kb on + strand, within MPMX26_02515 at 2598.970 kb on + strand, within MPMX26_02515 at 2598.970 kb on + strand, within MPMX26_02515 at 2598.989 kb on + strand, within MPMX26_02515 at 2598.989 kb on + strand, within MPMX26_02515 at 2599.008 kb on + strand, within MPMX26_02515 at 2599.024 kb on + strand, within MPMX26_02515 at 2599.052 kb on + strand, within MPMX26_02515 at 2599.097 kb on + strand, within MPMX26_02515 at 2599.102 kb on + strand, within MPMX26_02515 at 2599.102 kb on + strand, within MPMX26_02515 at 2599.102 kb on + strand, within MPMX26_02515 at 2599.102 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.112 kb on + strand, within MPMX26_02515 at 2599.117 kb on + strand, within MPMX26_02515 at 2599.122 kb on + strand, within MPMX26_02515 at 2599.202 kb on + strand, within MPMX26_02515 at 2599.258 kb on + strand, within MPMX26_02515 at 2599.258 kb on + strand, within MPMX26_02515 at 2599.270 kb on + strand, within MPMX26_02515 at 2599.270 kb on + strand, within MPMX26_02515 at 2599.270 kb on + strand, within MPMX26_02515 at 2599.270 kb on + strand, within MPMX26_02515 at 2599.301 kb on + strand, within MPMX26_02515 at 2599.315 kb on + strand, within MPMX26_02515 at 2599.315 kb on + strand, within MPMX26_02515 at 2599.418 kb on + strand at 2599.423 kb on + strand at 2599.428 kb on + strand at 2599.470 kb on + strand at 2599.474 kb on + strand at 2599.474 kb on + strand at 2599.504 kb on + strand at 2599.514 kb on + strand at 2599.514 kb on + strand at 2599.526 kb on + strand at 2599.561 kb on + strand at 2599.577 kb on + strand at 2599.602 kb on + strand at 2599.610 kb on + strand at 2599.642 kb on + strand at 2599.642 kb on + strand at 2599.642 kb on + strand at 2599.642 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.643 kb on + strand at 2599.645 kb on + strand at 2599.661 kb on + strand at 2599.720 kb on + strand at 2599.741 kb on + strand at 2599.799 kb on + strand at 2599.799 kb on + strand at 2599.853 kb on + strand, within MPMX26_02516 at 2599.858 kb on + strand, within MPMX26_02516 at 2599.858 kb on + strand, within MPMX26_02516 at 2599.889 kb on + strand, within MPMX26_02516 at 2599.903 kb on + strand, within MPMX26_02516 at 2599.960 kb on + strand, within MPMX26_02516 at 2599.966 kb on + strand, within MPMX26_02516 at 2599.996 kb on + strand, within MPMX26_02516 at 2599.996 kb on + strand, within MPMX26_02516 at 2599.996 kb on + strand, within MPMX26_02516 at 2599.996 kb on + strand, within MPMX26_02516 at 2600.037 kb on + strand, within MPMX26_02516 at 2600.081 kb on + strand, within MPMX26_02516 at 2600.113 kb on + strand, within MPMX26_02516 at 2600.143 kb on + strand, within MPMX26_02516 at 2600.156 kb on + strand, within MPMX26_02516 at 2600.177 kb on + strand, within MPMX26_02516 at 2600.293 kb on + strand, within MPMX26_02516 at 2600.423 kb on + strand, within MPMX26_02516 at 2600.423 kb on + strand, within MPMX26_02516
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,597,749 + -1.3 2,597,778 + +0.9 2,597,788 + MPMX26_02514 0.11 -0.2 2,597,788 + MPMX26_02514 0.11 -0.4 2,597,790 + MPMX26_02514 0.12 +0.3 2,597,837 + MPMX26_02514 0.20 -0.3 2,597,910 + MPMX26_02514 0.32 +0.8 2,597,910 + MPMX26_02514 0.32 -1.4 2,597,910 + MPMX26_02514 0.32 +0.1 2,597,956 + MPMX26_02514 0.40 +0.2 2,597,956 + MPMX26_02514 0.40 +2.1 2,597,956 + MPMX26_02514 0.40 -0.4 2,597,956 + MPMX26_02514 0.40 -0.5 2,597,956 + MPMX26_02514 0.40 -1.6 2,597,956 + MPMX26_02514 0.40 +0.2 2,597,956 + MPMX26_02514 0.40 -2.3 2,597,956 + MPMX26_02514 0.40 -0.1 2,597,956 + MPMX26_02514 0.40 -0.0 2,597,956 + MPMX26_02514 0.40 +2.1 2,597,956 + MPMX26_02514 0.40 -0.7 2,597,956 + MPMX26_02514 0.40 +0.6 2,597,956 + MPMX26_02514 0.40 -0.8 2,597,956 + MPMX26_02514 0.40 -1.5 2,597,956 + MPMX26_02514 0.40 -1.0 2,597,956 + MPMX26_02514 0.40 -1.0 2,597,956 + MPMX26_02514 0.40 +2.1 2,597,956 + MPMX26_02514 0.40 +0.5 2,597,956 + MPMX26_02514 0.40 -0.3 2,598,019 + MPMX26_02514 0.51 -0.1 2,598,019 + MPMX26_02514 0.51 +1.1 2,598,024 + MPMX26_02514 0.52 +0.9 2,598,024 + MPMX26_02514 0.52 -1.3 2,598,024 + MPMX26_02514 0.52 -0.7 2,598,024 + MPMX26_02514 0.52 -1.0 2,598,108 + MPMX26_02514 0.66 +0.4 2,598,148 + MPMX26_02514 0.73 +1.7 2,598,154 + MPMX26_02514 0.74 +1.5 2,598,253 + +1.0 2,598,253 + -1.3 2,598,253 + +2.1 2,598,394 + -0.2 2,598,394 + -0.2 2,598,394 + +0.7 2,598,417 + -0.1 2,598,426 + -0.0 2,598,427 + -0.1 2,598,436 + -0.9 2,598,442 + -1.7 2,598,452 + -0.7 2,598,463 + -0.5 2,598,547 + MPMX26_02515 0.16 -0.5 2,598,560 + MPMX26_02515 0.17 +1.2 2,598,573 + MPMX26_02515 0.18 -0.1 2,598,581 + MPMX26_02515 0.19 -2.0 2,598,647 + MPMX26_02515 0.25 +0.3 2,598,665 + MPMX26_02515 0.27 +2.9 2,598,665 + MPMX26_02515 0.27 -1.5 2,598,682 + MPMX26_02515 0.28 -0.6 2,598,736 + MPMX26_02515 0.33 -0.9 2,598,823 + MPMX26_02515 0.41 -0.0 2,598,846 + MPMX26_02515 0.43 +0.3 2,598,870 + MPMX26_02515 0.45 +0.8 2,598,875 + MPMX26_02515 0.45 +0.7 2,598,884 + MPMX26_02515 0.46 +2.1 2,598,920 + MPMX26_02515 0.49 +0.6 2,598,920 + MPMX26_02515 0.49 -1.0 2,598,941 + MPMX26_02515 0.51 -0.6 2,598,970 + MPMX26_02515 0.54 -0.5 2,598,970 + MPMX26_02515 0.54 +0.0 2,598,970 + MPMX26_02515 0.54 -0.0 2,598,989 + MPMX26_02515 0.55 -0.4 2,598,989 + MPMX26_02515 0.55 -0.9 2,599,008 + MPMX26_02515 0.57 -1.3 2,599,024 + MPMX26_02515 0.58 -0.7 2,599,052 + MPMX26_02515 0.61 +0.3 2,599,097 + MPMX26_02515 0.65 -0.0 2,599,102 + MPMX26_02515 0.65 +0.5 2,599,102 + MPMX26_02515 0.65 -0.2 2,599,102 + MPMX26_02515 0.65 +0.1 2,599,102 + MPMX26_02515 0.65 -1.0 2,599,112 + MPMX26_02515 0.66 +0.2 2,599,112 + MPMX26_02515 0.66 -0.9 2,599,112 + MPMX26_02515 0.66 +1.0 2,599,112 + MPMX26_02515 0.66 -0.3 2,599,112 + MPMX26_02515 0.66 +0.7 2,599,112 + MPMX26_02515 0.66 +0.4 2,599,117 + MPMX26_02515 0.67 +0.6 2,599,122 + MPMX26_02515 0.67 -0.4 2,599,202 + MPMX26_02515 0.74 -0.3 2,599,258 + MPMX26_02515 0.79 -0.1 2,599,258 + MPMX26_02515 0.79 -3.7 2,599,270 + MPMX26_02515 0.80 -0.1 2,599,270 + MPMX26_02515 0.80 -0.0 2,599,270 + MPMX26_02515 0.80 -1.6 2,599,270 + MPMX26_02515 0.80 -1.6 2,599,301 + MPMX26_02515 0.83 -2.0 2,599,315 + MPMX26_02515 0.84 +0.1 2,599,315 + MPMX26_02515 0.84 +0.4 2,599,418 + +0.3 2,599,423 + -0.2 2,599,428 + +1.4 2,599,470 + -1.0 2,599,474 + +0.5 2,599,474 + +0.5 2,599,504 + -0.8 2,599,514 + +0.3 2,599,514 + +0.3 2,599,526 + +1.8 2,599,561 + +0.6 2,599,577 + +1.2 2,599,602 + -1.1 2,599,610 + +0.3 2,599,642 + -0.9 2,599,642 + -0.8 2,599,642 + +0.0 2,599,642 + -2.0 2,599,643 + +1.1 2,599,643 + -0.7 2,599,643 + -1.6 2,599,643 + +0.8 2,599,643 + +0.1 2,599,643 + +0.7 2,599,645 + -1.9 2,599,661 + +0.2 2,599,720 + -2.1 2,599,741 + -0.2 2,599,799 + -0.5 2,599,799 + +0.3 2,599,853 + MPMX26_02516 0.11 -0.4 2,599,858 + MPMX26_02516 0.11 +0.6 2,599,858 + MPMX26_02516 0.11 +1.0 2,599,889 + MPMX26_02516 0.12 +0.7 2,599,903 + MPMX26_02516 0.13 -2.9 2,599,960 + MPMX26_02516 0.15 -0.8 2,599,966 + MPMX26_02516 0.15 -1.1 2,599,996 + MPMX26_02516 0.16 +0.7 2,599,996 + MPMX26_02516 0.16 +0.2 2,599,996 + MPMX26_02516 0.16 -2.0 2,599,996 + MPMX26_02516 0.16 +0.0 2,600,037 + MPMX26_02516 0.17 +2.2 2,600,081 + MPMX26_02516 0.19 +0.5 2,600,113 + MPMX26_02516 0.20 -0.4 2,600,143 + MPMX26_02516 0.21 +1.2 2,600,156 + MPMX26_02516 0.21 -0.1 2,600,177 + MPMX26_02516 0.22 -0.8 2,600,293 + MPMX26_02516 0.25 -0.2 2,600,423 + MPMX26_02516 0.30 -0.5 2,600,423 + MPMX26_02516 0.30 +0.7
Or see this region's nucleotide sequence