Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02457

Experiment: L-Serine (N)

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntMPMX26_02456 and MPMX26_02457 are separated by 533 nucleotidesMPMX26_02457 and MPMX26_02458 overlap by 13 nucleotides MPMX26_02456: MPMX26_02456 - Bacterioferritin, at 2,538,438 to 2,538,902 _02456 MPMX26_02457: MPMX26_02457 - Trehalose-6-phosphate phosphatase, at 2,539,436 to 2,540,284 _02457 MPMX26_02458: MPMX26_02458 - Trehalose-6-phosphate synthase, at 2,540,272 to 2,541,708 _02458 Position (kb) 2539 2540 2541Strain fitness (log2 ratio) -1 0 1 2at 2538.519 kb on - strand, within MPMX26_02456at 2538.519 kb on - strand, within MPMX26_02456at 2538.534 kb on - strand, within MPMX26_02456at 2538.534 kb on - strand, within MPMX26_02456at 2538.534 kb on - strand, within MPMX26_02456at 2538.559 kb on - strand, within MPMX26_02456at 2538.569 kb on - strand, within MPMX26_02456at 2538.572 kb on - strand, within MPMX26_02456at 2538.595 kb on - strand, within MPMX26_02456at 2538.625 kb on - strand, within MPMX26_02456at 2538.659 kb on + strand, within MPMX26_02456at 2538.659 kb on - strand, within MPMX26_02456at 2538.667 kb on - strand, within MPMX26_02456at 2538.667 kb on - strand, within MPMX26_02456at 2538.667 kb on - strand, within MPMX26_02456at 2538.667 kb on - strand, within MPMX26_02456at 2538.679 kb on - strand, within MPMX26_02456at 2538.679 kb on - strand, within MPMX26_02456at 2538.679 kb on - strand, within MPMX26_02456at 2538.679 kb on - strand, within MPMX26_02456at 2538.679 kb on - strand, within MPMX26_02456at 2538.689 kb on - strand, within MPMX26_02456at 2538.803 kb on - strand, within MPMX26_02456at 2538.866 kb on - strandat 2538.874 kb on - strandat 2538.884 kb on - strandat 2538.884 kb on - strandat 2538.884 kb on - strandat 2538.892 kb on - strandat 2538.892 kb on - strandat 2538.908 kb on - strandat 2539.466 kb on + strandat 2539.466 kb on + strandat 2539.890 kb on + strand, within MPMX26_02457

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
remove
2,538,519 - MPMX26_02456 0.17 +0.6
2,538,519 - MPMX26_02456 0.17 +0.3
2,538,534 - MPMX26_02456 0.21 +0.6
2,538,534 - MPMX26_02456 0.21 +1.2
2,538,534 - MPMX26_02456 0.21 +0.4
2,538,559 - MPMX26_02456 0.26 +1.3
2,538,569 - MPMX26_02456 0.28 +0.5
2,538,572 - MPMX26_02456 0.29 +0.4
2,538,595 - MPMX26_02456 0.34 +1.3
2,538,625 - MPMX26_02456 0.40 +1.4
2,538,659 + MPMX26_02456 0.48 +2.5
2,538,659 - MPMX26_02456 0.48 +0.4
2,538,667 - MPMX26_02456 0.49 -0.3
2,538,667 - MPMX26_02456 0.49 +0.3
2,538,667 - MPMX26_02456 0.49 +1.6
2,538,667 - MPMX26_02456 0.49 -0.5
2,538,679 - MPMX26_02456 0.52 +0.9
2,538,679 - MPMX26_02456 0.52 -0.8
2,538,679 - MPMX26_02456 0.52 -0.2
2,538,679 - MPMX26_02456 0.52 -0.8
2,538,679 - MPMX26_02456 0.52 +0.6
2,538,689 - MPMX26_02456 0.54 +1.4
2,538,803 - MPMX26_02456 0.78 +0.4
2,538,866 - +0.4
2,538,874 - +0.9
2,538,884 - +0.2
2,538,884 - -0.2
2,538,884 - +0.3
2,538,892 - -0.3
2,538,892 - -0.5
2,538,908 - +0.1
2,539,466 + +2.3
2,539,466 + +1.3
2,539,890 + MPMX26_02457 0.53 +0.9

Or see this region's nucleotide sequence