Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_02403

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_02402 and MPMX26_02403 overlap by 4 nucleotidesMPMX26_02403 and MPMX26_02404 are separated by 59 nucleotidesMPMX26_02404 and MPMX26_02405 are separated by 123 nucleotides MPMX26_02402: MPMX26_02402 - Nuclease SbcCD subunit D, at 2,485,015 to 2,486,304 _02402 MPMX26_02403: MPMX26_02403 - hypothetical protein, at 2,486,301 to 2,489,903 _02403 MPMX26_02404: MPMX26_02404 - Pyridoxal phosphate homeostasis protein, at 2,489,963 to 2,490,658 _02404 MPMX26_02405: MPMX26_02405 - Twitching mobility protein, at 2,490,782 to 2,491,819 _02405 Position (kb) 2486 2487 2488 2489 2490Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2485.329 kb on + strand, within MPMX26_02402at 2485.465 kb on + strand, within MPMX26_02402at 2485.575 kb on + strand, within MPMX26_02402at 2485.618 kb on + strand, within MPMX26_02402at 2485.753 kb on + strand, within MPMX26_02402at 2485.948 kb on + strand, within MPMX26_02402at 2486.031 kb on + strand, within MPMX26_02402at 2486.258 kb on + strandat 2486.391 kb on + strandat 2486.501 kb on + strandat 2486.541 kb on + strandat 2486.550 kb on + strandat 2486.558 kb on + strandat 2486.568 kb on + strandat 2486.685 kb on + strand, within MPMX26_02403at 2486.698 kb on - strand, within MPMX26_02403at 2486.725 kb on + strand, within MPMX26_02403at 2487.104 kb on + strand, within MPMX26_02403at 2487.143 kb on + strand, within MPMX26_02403at 2487.882 kb on - strand, within MPMX26_02403at 2488.289 kb on + strand, within MPMX26_02403at 2489.052 kb on + strand, within MPMX26_02403at 2489.984 kb on - strandat 2490.001 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.011 kb on - strandat 2490.017 kb on - strandat 2490.050 kb on - strand, within MPMX26_02404at 2490.076 kb on - strand, within MPMX26_02404at 2490.103 kb on - strand, within MPMX26_02404at 2490.113 kb on - strand, within MPMX26_02404at 2490.122 kb on - strand, within MPMX26_02404at 2490.158 kb on - strand, within MPMX26_02404at 2490.158 kb on - strand, within MPMX26_02404at 2490.221 kb on - strand, within MPMX26_02404at 2490.221 kb on - strand, within MPMX26_02404at 2490.241 kb on - strand, within MPMX26_02404at 2490.241 kb on - strand, within MPMX26_02404at 2490.248 kb on - strand, within MPMX26_02404at 2490.281 kb on - strand, within MPMX26_02404at 2490.301 kb on - strand, within MPMX26_02404at 2490.301 kb on - strand, within MPMX26_02404at 2490.318 kb on - strand, within MPMX26_02404at 2490.325 kb on - strand, within MPMX26_02404at 2490.332 kb on - strand, within MPMX26_02404at 2490.337 kb on - strand, within MPMX26_02404at 2490.347 kb on - strand, within MPMX26_02404at 2490.412 kb on - strand, within MPMX26_02404at 2490.482 kb on - strand, within MPMX26_02404at 2490.521 kb on - strand, within MPMX26_02404at 2490.602 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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2,485,329 + MPMX26_02402 0.24 -1.6
2,485,465 + MPMX26_02402 0.35 -1.5
2,485,575 + MPMX26_02402 0.43 -1.0
2,485,618 + MPMX26_02402 0.47 +0.3
2,485,753 + MPMX26_02402 0.57 -0.6
2,485,948 + MPMX26_02402 0.72 +0.3
2,486,031 + MPMX26_02402 0.79 +0.6
2,486,258 + +0.5
2,486,391 + +1.3
2,486,501 + +2.2
2,486,541 + -0.8
2,486,550 + +0.0
2,486,558 + +1.3
2,486,568 + -0.2
2,486,685 + MPMX26_02403 0.11 -0.2
2,486,698 - MPMX26_02403 0.11 -0.6
2,486,725 + MPMX26_02403 0.12 -1.4
2,487,104 + MPMX26_02403 0.22 +0.7
2,487,143 + MPMX26_02403 0.23 -1.3
2,487,882 - MPMX26_02403 0.44 -0.0
2,488,289 + MPMX26_02403 0.55 +1.5
2,489,052 + MPMX26_02403 0.76 -0.2
2,489,984 - -0.3
2,490,001 - -0.5
2,490,011 - +0.1
2,490,011 - -0.2
2,490,011 - -2.0
2,490,011 - -0.7
2,490,011 - +0.2
2,490,011 - +0.1
2,490,011 - -1.5
2,490,017 - -3.1
2,490,050 - MPMX26_02404 0.12 -1.1
2,490,076 - MPMX26_02404 0.16 +1.5
2,490,103 - MPMX26_02404 0.20 -1.1
2,490,113 - MPMX26_02404 0.22 -1.0
2,490,122 - MPMX26_02404 0.23 -1.0
2,490,158 - MPMX26_02404 0.28 +0.5
2,490,158 - MPMX26_02404 0.28 -1.2
2,490,221 - MPMX26_02404 0.37 -0.5
2,490,221 - MPMX26_02404 0.37 -1.6
2,490,241 - MPMX26_02404 0.40 -1.0
2,490,241 - MPMX26_02404 0.40 -0.7
2,490,248 - MPMX26_02404 0.41 -0.8
2,490,281 - MPMX26_02404 0.46 -0.3
2,490,301 - MPMX26_02404 0.49 -1.2
2,490,301 - MPMX26_02404 0.49 -1.1
2,490,318 - MPMX26_02404 0.51 +0.8
2,490,325 - MPMX26_02404 0.52 +0.2
2,490,332 - MPMX26_02404 0.53 -1.3
2,490,337 - MPMX26_02404 0.54 -0.2
2,490,347 - MPMX26_02404 0.55 -1.4
2,490,412 - MPMX26_02404 0.65 -3.6
2,490,482 - MPMX26_02404 0.75 -0.3
2,490,521 - MPMX26_02404 0.80 -0.9
2,490,602 - -1.6

Or see this region's nucleotide sequence