Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_02144 and MPMX26_02145 are separated by 49 nucleotides MPMX26_02145 and MPMX26_02146 are separated by 212 nucleotides MPMX26_02146 and MPMX26_02147 are separated by 58 nucleotides MPMX26_02147 and MPMX26_02148 are separated by 108 nucleotides
MPMX26_02144: MPMX26_02144 - hypothetical protein, at 2,202,865 to 2,204,298
_02144
MPMX26_02145: MPMX26_02145 - hypothetical protein, at 2,204,348 to 2,204,515
_02145
MPMX26_02146: MPMX26_02146 - Aspartate/prephenate aminotransferase, at 2,204,728 to 2,205,963
_02146
MPMX26_02147: MPMX26_02147 - putative HTH-type transcriptional regulator, at 2,206,022 to 2,206,390
_02147
MPMX26_02148: MPMX26_02148 - hypothetical protein, at 2,206,499 to 2,206,936
_02148
Position (kb)
2204
2205
2206 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2203.753 kb on + strand, within MPMX26_02144 at 2203.832 kb on + strand, within MPMX26_02144 at 2203.832 kb on + strand, within MPMX26_02144 at 2203.851 kb on + strand, within MPMX26_02144 at 2203.896 kb on + strand, within MPMX26_02144 at 2203.933 kb on + strand, within MPMX26_02144 at 2203.969 kb on + strand, within MPMX26_02144 at 2203.990 kb on + strand, within MPMX26_02144 at 2203.990 kb on + strand, within MPMX26_02144 at 2204.002 kb on + strand, within MPMX26_02144 at 2204.037 kb on + strand, within MPMX26_02144 at 2204.139 kb on + strand, within MPMX26_02144 at 2204.139 kb on + strand, within MPMX26_02144 at 2204.157 kb on + strand at 2204.197 kb on + strand at 2204.197 kb on + strand at 2204.205 kb on - strand at 2204.227 kb on - strand at 2204.248 kb on + strand at 2204.248 kb on - strand at 2204.253 kb on - strand at 2204.305 kb on - strand at 2204.305 kb on - strand at 2204.315 kb on - strand at 2204.315 kb on - strand at 2204.315 kb on - strand at 2204.315 kb on - strand at 2204.364 kb on - strand at 2204.369 kb on - strand, within MPMX26_02145 at 2204.386 kb on - strand, within MPMX26_02145 at 2204.391 kb on - strand, within MPMX26_02145 at 2204.396 kb on - strand, within MPMX26_02145 at 2204.416 kb on - strand, within MPMX26_02145 at 2204.440 kb on - strand, within MPMX26_02145 at 2204.440 kb on - strand, within MPMX26_02145 at 2204.452 kb on - strand, within MPMX26_02145 at 2204.492 kb on - strand, within MPMX26_02145 at 2204.517 kb on - strand at 2204.517 kb on - strand at 2204.731 kb on + strand at 2204.738 kb on + strand at 2204.771 kb on + strand at 2204.805 kb on + strand at 2204.805 kb on + strand at 2204.805 kb on + strand at 2204.805 kb on + strand at 2204.805 kb on + strand at 2204.839 kb on + strand at 2204.840 kb on + strand at 2204.845 kb on + strand at 2204.864 kb on + strand, within MPMX26_02146 at 2204.864 kb on + strand, within MPMX26_02146 at 2204.864 kb on + strand, within MPMX26_02146 at 2204.864 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.866 kb on + strand, within MPMX26_02146 at 2204.874 kb on + strand, within MPMX26_02146 at 2204.874 kb on + strand, within MPMX26_02146 at 2204.901 kb on + strand, within MPMX26_02146 at 2204.970 kb on + strand, within MPMX26_02146 at 2204.970 kb on + strand, within MPMX26_02146 at 2204.970 kb on + strand, within MPMX26_02146 at 2204.978 kb on - strand, within MPMX26_02146 at 2205.028 kb on + strand, within MPMX26_02146 at 2205.028 kb on + strand, within MPMX26_02146 at 2205.089 kb on + strand, within MPMX26_02146 at 2205.164 kb on + strand, within MPMX26_02146 at 2205.188 kb on + strand, within MPMX26_02146 at 2205.188 kb on + strand, within MPMX26_02146 at 2205.198 kb on + strand, within MPMX26_02146 at 2205.235 kb on + strand, within MPMX26_02146 at 2205.240 kb on + strand, within MPMX26_02146 at 2205.247 kb on + strand, within MPMX26_02146 at 2205.247 kb on + strand, within MPMX26_02146 at 2205.262 kb on + strand, within MPMX26_02146 at 2205.293 kb on + strand, within MPMX26_02146 at 2205.293 kb on + strand, within MPMX26_02146 at 2205.404 kb on + strand, within MPMX26_02146 at 2205.438 kb on + strand, within MPMX26_02146 at 2205.438 kb on + strand, within MPMX26_02146 at 2205.472 kb on + strand, within MPMX26_02146 at 2205.498 kb on + strand, within MPMX26_02146 at 2205.498 kb on + strand, within MPMX26_02146 at 2205.522 kb on + strand, within MPMX26_02146 at 2205.533 kb on + strand, within MPMX26_02146 at 2205.533 kb on + strand, within MPMX26_02146 at 2205.533 kb on + strand, within MPMX26_02146 at 2205.533 kb on + strand, within MPMX26_02146 at 2205.548 kb on + strand, within MPMX26_02146 at 2205.597 kb on + strand, within MPMX26_02146 at 2205.629 kb on + strand, within MPMX26_02146 at 2205.640 kb on + strand, within MPMX26_02146 at 2205.692 kb on + strand, within MPMX26_02146 at 2205.714 kb on + strand, within MPMX26_02146 at 2205.721 kb on + strand, within MPMX26_02146 at 2205.721 kb on + strand, within MPMX26_02146 at 2205.732 kb on + strand, within MPMX26_02146 at 2205.732 kb on + strand, within MPMX26_02146 at 2205.740 kb on + strand, within MPMX26_02146 at 2205.740 kb on + strand, within MPMX26_02146 at 2205.798 kb on + strand, within MPMX26_02146 at 2205.798 kb on + strand, within MPMX26_02146 at 2205.799 kb on + strand, within MPMX26_02146 at 2205.867 kb on + strand at 2205.905 kb on + strand at 2205.905 kb on + strand at 2205.914 kb on + strand at 2205.914 kb on + strand at 2206.599 kb on + strand, within MPMX26_02148
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 2,203,753 + MPMX26_02144 0.62 -0.9 2,203,832 + MPMX26_02144 0.67 +0.1 2,203,832 + MPMX26_02144 0.67 +1.0 2,203,851 + MPMX26_02144 0.69 -1.1 2,203,896 + MPMX26_02144 0.72 -0.8 2,203,933 + MPMX26_02144 0.74 +0.3 2,203,969 + MPMX26_02144 0.77 +0.2 2,203,990 + MPMX26_02144 0.78 +0.2 2,203,990 + MPMX26_02144 0.78 +0.0 2,204,002 + MPMX26_02144 0.79 +0.6 2,204,037 + MPMX26_02144 0.82 -0.9 2,204,139 + MPMX26_02144 0.89 -2.2 2,204,139 + MPMX26_02144 0.89 +1.2 2,204,157 + +0.0 2,204,197 + -2.1 2,204,197 + -0.3 2,204,205 - +0.1 2,204,227 - -0.2 2,204,248 + -0.1 2,204,248 - -0.4 2,204,253 - +0.1 2,204,305 - -0.2 2,204,305 - -0.0 2,204,315 - -0.0 2,204,315 - -0.5 2,204,315 - +0.1 2,204,315 - -0.3 2,204,364 - -0.5 2,204,369 - MPMX26_02145 0.12 +0.4 2,204,386 - MPMX26_02145 0.23 +0.6 2,204,391 - MPMX26_02145 0.26 +0.1 2,204,396 - MPMX26_02145 0.29 -0.3 2,204,416 - MPMX26_02145 0.40 +0.0 2,204,440 - MPMX26_02145 0.55 -0.1 2,204,440 - MPMX26_02145 0.55 -0.2 2,204,452 - MPMX26_02145 0.62 +0.5 2,204,492 - MPMX26_02145 0.86 -0.1 2,204,517 - -0.4 2,204,517 - -0.3 2,204,731 + -1.4 2,204,738 + -3.6 2,204,771 + -4.1 2,204,805 + -4.1 2,204,805 + -1.9 2,204,805 + -3.7 2,204,805 + -4.3 2,204,805 + -1.9 2,204,839 + -5.0 2,204,840 + -3.3 2,204,845 + -3.9 2,204,864 + MPMX26_02146 0.11 -4.0 2,204,864 + MPMX26_02146 0.11 -2.9 2,204,864 + MPMX26_02146 0.11 -3.6 2,204,864 + MPMX26_02146 0.11 -3.9 2,204,866 + MPMX26_02146 0.11 -2.9 2,204,866 + MPMX26_02146 0.11 -4.5 2,204,866 + MPMX26_02146 0.11 -4.4 2,204,866 + MPMX26_02146 0.11 -2.4 2,204,866 + MPMX26_02146 0.11 -1.7 2,204,866 + MPMX26_02146 0.11 -4.2 2,204,874 + MPMX26_02146 0.12 -3.4 2,204,874 + MPMX26_02146 0.12 -5.3 2,204,901 + MPMX26_02146 0.14 -3.9 2,204,970 + MPMX26_02146 0.20 -3.8 2,204,970 + MPMX26_02146 0.20 -5.2 2,204,970 + MPMX26_02146 0.20 -2.7 2,204,978 - MPMX26_02146 0.20 -1.8 2,205,028 + MPMX26_02146 0.24 -2.4 2,205,028 + MPMX26_02146 0.24 -2.8 2,205,089 + MPMX26_02146 0.29 -2.7 2,205,164 + MPMX26_02146 0.35 -2.8 2,205,188 + MPMX26_02146 0.37 -5.3 2,205,188 + MPMX26_02146 0.37 -4.5 2,205,198 + MPMX26_02146 0.38 -5.0 2,205,235 + MPMX26_02146 0.41 -4.3 2,205,240 + MPMX26_02146 0.41 -4.2 2,205,247 + MPMX26_02146 0.42 -5.1 2,205,247 + MPMX26_02146 0.42 -4.1 2,205,262 + MPMX26_02146 0.43 -3.8 2,205,293 + MPMX26_02146 0.46 -3.5 2,205,293 + MPMX26_02146 0.46 -4.8 2,205,404 + MPMX26_02146 0.55 -4.7 2,205,438 + MPMX26_02146 0.57 -5.1 2,205,438 + MPMX26_02146 0.57 -4.9 2,205,472 + MPMX26_02146 0.60 -4.2 2,205,498 + MPMX26_02146 0.62 -4.4 2,205,498 + MPMX26_02146 0.62 -4.3 2,205,522 + MPMX26_02146 0.64 -1.7 2,205,533 + MPMX26_02146 0.65 -4.8 2,205,533 + MPMX26_02146 0.65 -2.4 2,205,533 + MPMX26_02146 0.65 -3.4 2,205,533 + MPMX26_02146 0.65 -2.6 2,205,548 + MPMX26_02146 0.66 -4.2 2,205,597 + MPMX26_02146 0.70 -4.1 2,205,629 + MPMX26_02146 0.73 -4.7 2,205,640 + MPMX26_02146 0.74 -1.7 2,205,692 + MPMX26_02146 0.78 -3.0 2,205,714 + MPMX26_02146 0.80 -4.2 2,205,721 + MPMX26_02146 0.80 -3.7 2,205,721 + MPMX26_02146 0.80 -3.8 2,205,732 + MPMX26_02146 0.81 -3.6 2,205,732 + MPMX26_02146 0.81 -2.9 2,205,740 + MPMX26_02146 0.82 -3.4 2,205,740 + MPMX26_02146 0.82 -4.8 2,205,798 + MPMX26_02146 0.87 -4.0 2,205,798 + MPMX26_02146 0.87 -4.5 2,205,799 + MPMX26_02146 0.87 -4.2 2,205,867 + -3.9 2,205,905 + +0.5 2,205,905 + +0.7 2,205,914 + +0.2 2,205,914 + -0.0 2,206,599 + MPMX26_02148 0.23 -0.1
Or see this region's nucleotide sequence