Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_01956

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_01955 and MPMX26_01956 are separated by 130 nucleotidesMPMX26_01956 and MPMX26_01957 are separated by 146 nucleotides MPMX26_01955: MPMX26_01955 - Ferredoxin 1, at 2,011,672 to 2,011,995 _01955 MPMX26_01956: MPMX26_01956 - hypothetical protein, at 2,012,126 to 2,012,842 _01956 MPMX26_01957: MPMX26_01957 - Catechol O-methyltransferase, at 2,012,989 to 2,013,657 _01957 Position (kb) 2012 2013Strain fitness (log2 ratio) -2 -1 0 1 2at 2012.006 kb on + strandat 2012.206 kb on + strand, within MPMX26_01956at 2012.233 kb on + strand, within MPMX26_01956at 2012.281 kb on + strand, within MPMX26_01956at 2012.332 kb on + strand, within MPMX26_01956at 2012.332 kb on + strand, within MPMX26_01956at 2012.332 kb on + strand, within MPMX26_01956at 2012.332 kb on + strand, within MPMX26_01956at 2012.332 kb on + strand, within MPMX26_01956at 2012.332 kb on + strand, within MPMX26_01956at 2012.332 kb on + strand, within MPMX26_01956at 2012.371 kb on + strand, within MPMX26_01956at 2012.407 kb on + strand, within MPMX26_01956at 2012.407 kb on + strand, within MPMX26_01956at 2012.407 kb on + strand, within MPMX26_01956at 2012.447 kb on + strand, within MPMX26_01956at 2012.447 kb on + strand, within MPMX26_01956at 2012.588 kb on + strand, within MPMX26_01956at 2012.593 kb on + strand, within MPMX26_01956at 2012.642 kb on + strand, within MPMX26_01956at 2012.642 kb on + strand, within MPMX26_01956at 2012.642 kb on + strand, within MPMX26_01956at 2012.653 kb on + strand, within MPMX26_01956at 2012.665 kb on + strand, within MPMX26_01956at 2012.723 kb on + strand, within MPMX26_01956at 2012.747 kb on + strand, within MPMX26_01956at 2012.752 kb on + strand, within MPMX26_01956at 2012.773 kb on + strandat 2012.802 kb on + strandat 2012.807 kb on + strandat 2012.807 kb on + strandat 2012.807 kb on + strandat 2012.807 kb on + strandat 2012.807 kb on + strandat 2012.807 kb on + strandat 2012.814 kb on + strandat 2012.997 kb on + strandat 2012.997 kb on + strandat 2012.997 kb on + strandat 2013.067 kb on + strand, within MPMX26_01957at 2013.069 kb on + strand, within MPMX26_01957at 2013.069 kb on + strand, within MPMX26_01957at 2013.082 kb on + strand, within MPMX26_01957at 2013.083 kb on + strand, within MPMX26_01957at 2013.113 kb on + strand, within MPMX26_01957at 2013.118 kb on + strand, within MPMX26_01957at 2013.180 kb on + strand, within MPMX26_01957at 2013.193 kb on + strand, within MPMX26_01957at 2013.195 kb on + strand, within MPMX26_01957at 2013.195 kb on + strand, within MPMX26_01957at 2013.195 kb on + strand, within MPMX26_01957at 2013.204 kb on + strand, within MPMX26_01957at 2013.225 kb on + strand, within MPMX26_01957at 2013.233 kb on + strand, within MPMX26_01957at 2013.236 kb on + strand, within MPMX26_01957at 2013.248 kb on + strand, within MPMX26_01957at 2013.250 kb on + strand, within MPMX26_01957at 2013.250 kb on + strand, within MPMX26_01957at 2013.265 kb on + strand, within MPMX26_01957at 2013.285 kb on + strand, within MPMX26_01957at 2013.443 kb on + strand, within MPMX26_01957at 2013.598 kb on + strandat 2013.622 kb on + strandat 2013.637 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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2,012,006 + -0.2
2,012,206 + MPMX26_01956 0.11 +1.1
2,012,233 + MPMX26_01956 0.15 +1.5
2,012,281 + MPMX26_01956 0.22 -0.9
2,012,332 + MPMX26_01956 0.29 +0.4
2,012,332 + MPMX26_01956 0.29 +1.2
2,012,332 + MPMX26_01956 0.29 -0.2
2,012,332 + MPMX26_01956 0.29 +0.2
2,012,332 + MPMX26_01956 0.29 +0.3
2,012,332 + MPMX26_01956 0.29 +1.1
2,012,332 + MPMX26_01956 0.29 +0.8
2,012,371 + MPMX26_01956 0.34 +1.5
2,012,407 + MPMX26_01956 0.39 -0.0
2,012,407 + MPMX26_01956 0.39 +0.1
2,012,407 + MPMX26_01956 0.39 +0.8
2,012,447 + MPMX26_01956 0.45 -0.2
2,012,447 + MPMX26_01956 0.45 +0.9
2,012,588 + MPMX26_01956 0.64 -0.3
2,012,593 + MPMX26_01956 0.65 +1.1
2,012,642 + MPMX26_01956 0.72 +0.5
2,012,642 + MPMX26_01956 0.72 +0.3
2,012,642 + MPMX26_01956 0.72 +0.6
2,012,653 + MPMX26_01956 0.74 +1.3
2,012,665 + MPMX26_01956 0.75 +0.5
2,012,723 + MPMX26_01956 0.83 -2.3
2,012,747 + MPMX26_01956 0.87 +0.7
2,012,752 + MPMX26_01956 0.87 -0.7
2,012,773 + -0.2
2,012,802 + +1.3
2,012,807 + +1.2
2,012,807 + +2.1
2,012,807 + +0.9
2,012,807 + +1.0
2,012,807 + +1.3
2,012,807 + +2.3
2,012,814 + +0.8
2,012,997 + +0.1
2,012,997 + +0.9
2,012,997 + +0.5
2,013,067 + MPMX26_01957 0.12 +0.6
2,013,069 + MPMX26_01957 0.12 +0.7
2,013,069 + MPMX26_01957 0.12 +0.3
2,013,082 + MPMX26_01957 0.14 +0.5
2,013,083 + MPMX26_01957 0.14 +1.8
2,013,113 + MPMX26_01957 0.19 -1.0
2,013,118 + MPMX26_01957 0.19 -0.1
2,013,180 + MPMX26_01957 0.29 -1.2
2,013,193 + MPMX26_01957 0.30 +1.7
2,013,195 + MPMX26_01957 0.31 -0.3
2,013,195 + MPMX26_01957 0.31 +0.8
2,013,195 + MPMX26_01957 0.31 -2.2
2,013,204 + MPMX26_01957 0.32 +0.6
2,013,225 + MPMX26_01957 0.35 -0.1
2,013,233 + MPMX26_01957 0.36 +0.5
2,013,236 + MPMX26_01957 0.37 +1.0
2,013,248 + MPMX26_01957 0.39 +0.1
2,013,250 + MPMX26_01957 0.39 +0.2
2,013,250 + MPMX26_01957 0.39 +0.6
2,013,265 + MPMX26_01957 0.41 -0.4
2,013,285 + MPMX26_01957 0.44 -0.0
2,013,443 + MPMX26_01957 0.68 +0.8
2,013,598 + -0.7
2,013,622 + +0.2
2,013,637 + -0.5

Or see this region's nucleotide sequence