Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01340 and MPMX26_01341 are separated by 34 nucleotides MPMX26_01341 and MPMX26_01342 are separated by 265 nucleotides MPMX26_01342 and MPMX26_01343 are separated by 234 nucleotides MPMX26_01343 and MPMX26_01344 are separated by 14 nucleotides
MPMX26_01340: MPMX26_01340 - Chorismate synthase, at 1,414,597 to 1,415,688
_01340
MPMX26_01341: MPMX26_01341 - Putative competence-damage inducible protein, at 1,415,723 to 1,416,202
_01341
MPMX26_01342: MPMX26_01342 - hypothetical protein, at 1,416,468 to 1,416,701
_01342
MPMX26_01343: MPMX26_01343 - hypothetical protein, at 1,416,936 to 1,417,379
_01343
MPMX26_01344: MPMX26_01344 - hypothetical protein, at 1,417,394 to 1,417,945
_01344
Position (kb) 1416
1417 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1416.540 kb on + strand, within MPMX26_01342 at 1416.541 kb on + strand, within MPMX26_01342 at 1416.617 kb on + strand, within MPMX26_01342 at 1416.706 kb on + strand at 1417.661 kb on + strand, within MPMX26_01344 at 1417.696 kb on + strand, within MPMX26_01344
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,416,540 + MPMX26_01342 0.31 +0.7 1,416,541 + MPMX26_01342 0.31 +0.8 1,416,617 + MPMX26_01342 0.64 +1.1 1,416,706 + +2.5 1,417,661 + MPMX26_01344 0.48 +0.3 1,417,696 + MPMX26_01344 0.55 -1.9
Or see this region's nucleotide sequence