Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01236 and MPMX26_01237 are separated by 156 nucleotides MPMX26_01237 and MPMX26_01238 are separated by 21 nucleotides MPMX26_01238 and MPMX26_01239 are separated by 84 nucleotides MPMX26_01239 and MPMX26_01240 overlap by 4 nucleotides
MPMX26_01236: MPMX26_01236 - 30S ribosomal protein S1, at 1,306,890 to 1,308,563
_01236
MPMX26_01237: MPMX26_01237 - Integration host factor subunit beta, at 1,308,720 to 1,309,025
_01237
MPMX26_01238: MPMX26_01238 - hypothetical protein, at 1,309,047 to 1,309,412
_01238
MPMX26_01239: MPMX26_01239 - hypothetical protein, at 1,309,497 to 1,309,823
_01239
MPMX26_01240: MPMX26_01240 - hypothetical protein, at 1,309,820 to 1,310,476
_01240
Position (kb)
1308
1309
1310 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1308.286 kb on + strand, within MPMX26_01236 at 1308.633 kb on + strand at 1308.633 kb on + strand at 1308.641 kb on + strand at 1308.686 kb on + strand at 1308.992 kb on + strand, within MPMX26_01237 at 1309.019 kb on + strand at 1309.033 kb on + strand at 1309.043 kb on + strand at 1309.043 kb on + strand at 1309.099 kb on + strand, within MPMX26_01238 at 1309.151 kb on + strand, within MPMX26_01238 at 1309.151 kb on + strand, within MPMX26_01238 at 1309.189 kb on + strand, within MPMX26_01238 at 1309.225 kb on + strand, within MPMX26_01238 at 1309.230 kb on + strand, within MPMX26_01238 at 1309.245 kb on + strand, within MPMX26_01238 at 1309.275 kb on + strand, within MPMX26_01238 at 1309.307 kb on + strand, within MPMX26_01238 at 1309.307 kb on + strand, within MPMX26_01238 at 1309.307 kb on + strand, within MPMX26_01238 at 1309.307 kb on + strand, within MPMX26_01238 at 1309.307 kb on + strand, within MPMX26_01238 at 1309.312 kb on + strand, within MPMX26_01238 at 1309.317 kb on + strand, within MPMX26_01238 at 1309.332 kb on + strand, within MPMX26_01238 at 1309.396 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,308,286 + MPMX26_01236 0.83 +0.1 1,308,633 + +0.2 1,308,633 + -1.2 1,308,641 + -0.4 1,308,686 + -1.2 1,308,992 + MPMX26_01237 0.89 +2.1 1,309,019 + +2.5 1,309,033 + +2.2 1,309,043 + +2.6 1,309,043 + +2.4 1,309,099 + MPMX26_01238 0.14 +2.9 1,309,151 + MPMX26_01238 0.28 +2.5 1,309,151 + MPMX26_01238 0.28 +2.8 1,309,189 + MPMX26_01238 0.39 +3.3 1,309,225 + MPMX26_01238 0.49 +3.3 1,309,230 + MPMX26_01238 0.50 +2.7 1,309,245 + MPMX26_01238 0.54 +2.7 1,309,275 + MPMX26_01238 0.62 +2.1 1,309,307 + MPMX26_01238 0.71 +2.3 1,309,307 + MPMX26_01238 0.71 +2.8 1,309,307 + MPMX26_01238 0.71 +2.6 1,309,307 + MPMX26_01238 0.71 +2.6 1,309,307 + MPMX26_01238 0.71 +2.8 1,309,312 + MPMX26_01238 0.72 +3.2 1,309,317 + MPMX26_01238 0.74 +2.3 1,309,332 + MPMX26_01238 0.78 +2.0 1,309,396 + +0.5
Or see this region's nucleotide sequence