Experiment: L-Serine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX26_01051 and MPMX26_01052 are separated by 118 nucleotides MPMX26_01052 and MPMX26_01053 are separated by 160 nucleotides MPMX26_01053 and MPMX26_01054 are separated by 106 nucleotides
MPMX26_01051: MPMX26_01051 - D-alanyl-D-alanine carboxypeptidase DacA, at 1,114,894 to 1,116,042
_01051
MPMX26_01052: MPMX26_01052 - hypothetical protein, at 1,116,161 to 1,116,559
_01052
MPMX26_01053: MPMX26_01053 - hypothetical protein, at 1,116,720 to 1,117,091
_01053
MPMX26_01054: MPMX26_01054 - 5'-nucleotidase SurE, at 1,117,198 to 1,117,971
_01054
Position (kb)
1116
1117
1118 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1115.759 kb on - strand, within MPMX26_01051 at 1115.759 kb on - strand, within MPMX26_01051 at 1115.759 kb on - strand, within MPMX26_01051 at 1115.759 kb on - strand, within MPMX26_01051 at 1115.778 kb on - strand, within MPMX26_01051 at 1115.788 kb on - strand, within MPMX26_01051 at 1115.820 kb on - strand, within MPMX26_01051 at 1115.884 kb on - strand, within MPMX26_01051 at 1115.914 kb on - strand, within MPMX26_01051 at 1115.918 kb on - strand, within MPMX26_01051 at 1115.919 kb on - strand, within MPMX26_01051 at 1115.929 kb on - strand at 1115.929 kb on - strand at 1115.940 kb on - strand at 1115.945 kb on - strand at 1115.961 kb on - strand at 1115.977 kb on - strand at 1115.979 kb on - strand at 1115.979 kb on - strand at 1115.979 kb on - strand at 1115.987 kb on - strand at 1115.993 kb on - strand at 1116.013 kb on - strand at 1116.018 kb on - strand at 1116.018 kb on - strand at 1116.018 kb on - strand at 1116.018 kb on - strand at 1116.018 kb on - strand at 1116.250 kb on - strand, within MPMX26_01052 at 1116.250 kb on - strand, within MPMX26_01052 at 1116.250 kb on - strand, within MPMX26_01052 at 1116.295 kb on - strand, within MPMX26_01052 at 1116.319 kb on - strand, within MPMX26_01052 at 1116.341 kb on - strand, within MPMX26_01052 at 1116.343 kb on - strand, within MPMX26_01052 at 1116.343 kb on - strand, within MPMX26_01052 at 1116.343 kb on - strand, within MPMX26_01052 at 1116.371 kb on - strand, within MPMX26_01052 at 1116.371 kb on - strand, within MPMX26_01052 at 1116.371 kb on - strand, within MPMX26_01052 at 1116.514 kb on - strand, within MPMX26_01052 at 1116.514 kb on - strand, within MPMX26_01052 at 1116.532 kb on - strand at 1116.737 kb on - strand at 1116.737 kb on - strand at 1116.737 kb on - strand at 1116.737 kb on - strand at 1116.737 kb on - strand at 1116.792 kb on - strand, within MPMX26_01053 at 1116.816 kb on - strand, within MPMX26_01053 at 1116.816 kb on - strand, within MPMX26_01053 at 1116.816 kb on - strand, within MPMX26_01053 at 1116.903 kb on + strand, within MPMX26_01053 at 1116.911 kb on - strand, within MPMX26_01053 at 1116.981 kb on - strand, within MPMX26_01053 at 1117.011 kb on - strand, within MPMX26_01053 at 1117.011 kb on - strand, within MPMX26_01053 at 1117.016 kb on - strand, within MPMX26_01053 at 1117.040 kb on - strand, within MPMX26_01053 at 1117.058 kb on - strand at 1117.058 kb on - strand at 1117.067 kb on - strand at 1117.067 kb on - strand at 1117.225 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.270 kb on + strand at 1117.333 kb on + strand, within MPMX26_01054 at 1117.333 kb on + strand, within MPMX26_01054 at 1117.333 kb on + strand, within MPMX26_01054 at 1117.333 kb on + strand, within MPMX26_01054 at 1117.333 kb on + strand, within MPMX26_01054 at 1117.333 kb on + strand, within MPMX26_01054 at 1117.338 kb on + strand, within MPMX26_01054 at 1117.352 kb on + strand, within MPMX26_01054 at 1117.374 kb on + strand, within MPMX26_01054 at 1117.384 kb on + strand, within MPMX26_01054 at 1117.384 kb on + strand, within MPMX26_01054 at 1117.384 kb on + strand, within MPMX26_01054 at 1117.384 kb on + strand, within MPMX26_01054 at 1117.389 kb on + strand, within MPMX26_01054 at 1117.396 kb on + strand, within MPMX26_01054 at 1117.396 kb on + strand, within MPMX26_01054 at 1117.406 kb on + strand, within MPMX26_01054 at 1117.462 kb on + strand, within MPMX26_01054 at 1117.492 kb on + strand, within MPMX26_01054 at 1117.495 kb on + strand, within MPMX26_01054 at 1117.587 kb on + strand, within MPMX26_01054 at 1117.608 kb on + strand, within MPMX26_01054 at 1117.608 kb on + strand, within MPMX26_01054 at 1117.608 kb on + strand, within MPMX26_01054 at 1117.651 kb on + strand, within MPMX26_01054 at 1117.701 kb on + strand, within MPMX26_01054 at 1117.710 kb on + strand, within MPMX26_01054 at 1117.710 kb on + strand, within MPMX26_01054 at 1117.797 kb on + strand, within MPMX26_01054 at 1117.797 kb on + strand, within MPMX26_01054 at 1117.807 kb on + strand, within MPMX26_01054 at 1117.807 kb on + strand, within MPMX26_01054 at 1117.821 kb on + strand, within MPMX26_01054 at 1117.821 kb on + strand, within MPMX26_01054 at 1117.928 kb on + strand at 1117.933 kb on + strand at 1117.935 kb on + strand at 1117.935 kb on + strand at 1117.962 kb on + strand at 1118.070 kb on + strand at 1118.072 kb on + strand at 1118.072 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand at 1118.074 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Serine (N) remove 1,115,759 - MPMX26_01051 0.75 -0.1 1,115,759 - MPMX26_01051 0.75 -0.4 1,115,759 - MPMX26_01051 0.75 +0.1 1,115,759 - MPMX26_01051 0.75 -0.0 1,115,778 - MPMX26_01051 0.77 -0.1 1,115,788 - MPMX26_01051 0.78 -1.5 1,115,820 - MPMX26_01051 0.81 -0.9 1,115,884 - MPMX26_01051 0.86 -1.1 1,115,914 - MPMX26_01051 0.89 -3.1 1,115,918 - MPMX26_01051 0.89 -1.2 1,115,919 - MPMX26_01051 0.89 -0.9 1,115,929 - -2.2 1,115,929 - -0.2 1,115,940 - -1.8 1,115,945 - -1.2 1,115,961 - -1.0 1,115,977 - -0.7 1,115,979 - +0.5 1,115,979 - -1.0 1,115,979 - -0.7 1,115,987 - -0.9 1,115,993 - -1.7 1,116,013 - +0.2 1,116,018 - -1.0 1,116,018 - -1.2 1,116,018 - -0.8 1,116,018 - -2.0 1,116,018 - -0.9 1,116,250 - MPMX26_01052 0.22 -0.6 1,116,250 - MPMX26_01052 0.22 +0.7 1,116,250 - MPMX26_01052 0.22 +0.5 1,116,295 - MPMX26_01052 0.34 +0.5 1,116,319 - MPMX26_01052 0.40 -0.5 1,116,341 - MPMX26_01052 0.45 +0.2 1,116,343 - MPMX26_01052 0.46 +0.3 1,116,343 - MPMX26_01052 0.46 -0.1 1,116,343 - MPMX26_01052 0.46 +0.5 1,116,371 - MPMX26_01052 0.53 +0.2 1,116,371 - MPMX26_01052 0.53 -0.4 1,116,371 - MPMX26_01052 0.53 +0.3 1,116,514 - MPMX26_01052 0.88 -0.2 1,116,514 - MPMX26_01052 0.88 -0.2 1,116,532 - +0.6 1,116,737 - +0.2 1,116,737 - -1.2 1,116,737 - +0.6 1,116,737 - +0.2 1,116,737 - -0.6 1,116,792 - MPMX26_01053 0.19 +0.4 1,116,816 - MPMX26_01053 0.26 +0.8 1,116,816 - MPMX26_01053 0.26 +0.0 1,116,816 - MPMX26_01053 0.26 -0.9 1,116,903 + MPMX26_01053 0.49 -0.6 1,116,911 - MPMX26_01053 0.51 -1.1 1,116,981 - MPMX26_01053 0.70 +0.2 1,117,011 - MPMX26_01053 0.78 -0.2 1,117,011 - MPMX26_01053 0.78 +0.0 1,117,016 - MPMX26_01053 0.80 +0.3 1,117,040 - MPMX26_01053 0.86 -0.4 1,117,058 - -1.0 1,117,058 - +0.8 1,117,067 - +0.5 1,117,067 - +0.3 1,117,225 + -0.2 1,117,270 + -0.0 1,117,270 + +2.5 1,117,270 + +0.6 1,117,270 + +0.2 1,117,270 + -0.7 1,117,270 + +0.4 1,117,270 + +0.0 1,117,270 + +0.3 1,117,270 + +0.1 1,117,270 + +1.0 1,117,270 + -0.5 1,117,270 + -0.6 1,117,270 + +1.1 1,117,270 + +0.9 1,117,333 + MPMX26_01054 0.17 +0.0 1,117,333 + MPMX26_01054 0.17 -1.3 1,117,333 + MPMX26_01054 0.17 -0.6 1,117,333 + MPMX26_01054 0.17 -2.3 1,117,333 + MPMX26_01054 0.17 -1.5 1,117,333 + MPMX26_01054 0.17 -0.0 1,117,338 + MPMX26_01054 0.18 -0.2 1,117,352 + MPMX26_01054 0.20 -0.6 1,117,374 + MPMX26_01054 0.23 -0.0 1,117,384 + MPMX26_01054 0.24 +0.2 1,117,384 + MPMX26_01054 0.24 -0.2 1,117,384 + MPMX26_01054 0.24 +0.1 1,117,384 + MPMX26_01054 0.24 +0.3 1,117,389 + MPMX26_01054 0.25 +0.0 1,117,396 + MPMX26_01054 0.26 -0.5 1,117,396 + MPMX26_01054 0.26 -0.3 1,117,406 + MPMX26_01054 0.27 -0.1 1,117,462 + MPMX26_01054 0.34 +0.5 1,117,492 + MPMX26_01054 0.38 -0.1 1,117,495 + MPMX26_01054 0.38 -0.6 1,117,587 + MPMX26_01054 0.50 -0.5 1,117,608 + MPMX26_01054 0.53 -0.6 1,117,608 + MPMX26_01054 0.53 +0.1 1,117,608 + MPMX26_01054 0.53 +0.4 1,117,651 + MPMX26_01054 0.59 -0.8 1,117,701 + MPMX26_01054 0.65 +0.4 1,117,710 + MPMX26_01054 0.66 -0.3 1,117,710 + MPMX26_01054 0.66 -1.2 1,117,797 + MPMX26_01054 0.77 -0.3 1,117,797 + MPMX26_01054 0.77 +1.8 1,117,807 + MPMX26_01054 0.79 -0.6 1,117,807 + MPMX26_01054 0.79 +0.8 1,117,821 + MPMX26_01054 0.80 +0.2 1,117,821 + MPMX26_01054 0.80 +1.0 1,117,928 + -1.2 1,117,933 + -0.3 1,117,935 + -0.3 1,117,935 + -1.0 1,117,962 + +0.6 1,118,070 + +0.5 1,118,072 + -0.6 1,118,072 + -0.3 1,118,074 + +0.6 1,118,074 + +0.1 1,118,074 + +0.4 1,118,074 + +1.0 1,118,074 + +0.7 1,118,074 + +1.7 1,118,074 + +0.4 1,118,074 + -0.4 1,118,074 + +0.8 1,118,074 + -1.0 1,118,074 + -0.0
Or see this region's nucleotide sequence