Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00945

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00943 and MPMX26_00944 overlap by 8 nucleotidesMPMX26_00944 and MPMX26_00945 are separated by 147 nucleotidesMPMX26_00945 and MPMX26_00946 are separated by 18 nucleotides MPMX26_00943: MPMX26_00943 - 3-hydroxybutyryl-CoA dehydrogenase, at 993,870 to 994,889 _00943 MPMX26_00944: MPMX26_00944 - hypothetical protein, at 994,882 to 995,349 _00944 MPMX26_00945: MPMX26_00945 - Mandelamide hydrolase, at 995,497 to 996,609 _00945 MPMX26_00946: MPMX26_00946 - Flavin-dependent monooxygenase, oxygenase subunit HsaA, at 996,628 to 997,797 _00946 Position (kb) 995 996 997Strain fitness (log2 ratio) -3 -2 -1 0 1at 994.955 kb on - strand, within MPMX26_00944at 994.995 kb on - strand, within MPMX26_00944at 995.014 kb on - strand, within MPMX26_00944at 995.014 kb on - strand, within MPMX26_00944at 995.019 kb on - strand, within MPMX26_00944at 995.061 kb on - strand, within MPMX26_00944at 995.095 kb on - strand, within MPMX26_00944at 995.313 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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994,955 - MPMX26_00944 0.16 -2.1
994,995 - MPMX26_00944 0.24 -1.8
995,014 - MPMX26_00944 0.28 -1.3
995,014 - MPMX26_00944 0.28 -0.8
995,019 - MPMX26_00944 0.29 -0.4
995,061 - MPMX26_00944 0.38 -0.2
995,095 - MPMX26_00944 0.46 -3.4
995,313 - -0.6

Or see this region's nucleotide sequence