Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00454

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00452 and MPMX26_00453 overlap by 11 nucleotidesMPMX26_00453 and MPMX26_00454 are separated by 27 nucleotidesMPMX26_00454 and MPMX26_00455 are separated by 37 nucleotidesMPMX26_00455 and MPMX26_00456 overlap by 1 nucleotides MPMX26_00452: MPMX26_00452 - Glucose-1-phosphate thymidylyltransferase 1, at 485,728 to 486,618 _00452 MPMX26_00453: MPMX26_00453 - dTDP-4-dehydrorhamnose 3,5-epimerase, at 486,608 to 487,159 _00453 MPMX26_00454: MPMX26_00454 - hypothetical protein, at 487,187 to 488,206 _00454 MPMX26_00455: MPMX26_00455 - hypothetical protein, at 488,244 to 489,182 _00455 MPMX26_00456: MPMX26_00456 - hypothetical protein, at 489,182 to 489,400 _00456 Position (kb) 487 488 489Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 486.199 kb on + strand, within MPMX26_00452at 486.253 kb on + strand, within MPMX26_00452at 486.253 kb on + strand, within MPMX26_00452at 486.253 kb on + strand, within MPMX26_00452at 486.254 kb on + strand, within MPMX26_00452at 486.277 kb on + strand, within MPMX26_00452at 486.277 kb on + strand, within MPMX26_00452at 486.336 kb on + strand, within MPMX26_00452at 486.385 kb on + strand, within MPMX26_00452at 486.416 kb on + strand, within MPMX26_00452at 486.455 kb on + strand, within MPMX26_00452at 486.545 kb on + strandat 486.575 kb on + strandat 486.693 kb on + strand, within MPMX26_00453at 486.693 kb on + strand, within MPMX26_00453at 486.708 kb on + strand, within MPMX26_00453at 486.788 kb on + strand, within MPMX26_00453at 486.838 kb on + strand, within MPMX26_00453at 486.843 kb on + strand, within MPMX26_00453at 486.843 kb on + strand, within MPMX26_00453at 486.848 kb on + strand, within MPMX26_00453at 486.848 kb on + strand, within MPMX26_00453at 486.848 kb on + strand, within MPMX26_00453at 486.892 kb on + strand, within MPMX26_00453at 486.908 kb on + strand, within MPMX26_00453at 486.913 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.918 kb on + strand, within MPMX26_00453at 486.920 kb on + strand, within MPMX26_00453at 486.920 kb on + strand, within MPMX26_00453at 486.920 kb on + strand, within MPMX26_00453at 486.920 kb on + strand, within MPMX26_00453at 486.966 kb on + strand, within MPMX26_00453at 486.966 kb on + strand, within MPMX26_00453at 486.987 kb on + strand, within MPMX26_00453at 486.989 kb on + strand, within MPMX26_00453at 486.989 kb on + strand, within MPMX26_00453at 487.020 kb on + strand, within MPMX26_00453at 487.068 kb on + strand, within MPMX26_00453at 487.068 kb on + strand, within MPMX26_00453at 487.068 kb on + strand, within MPMX26_00453at 487.068 kb on + strand, within MPMX26_00453at 487.068 kb on + strand, within MPMX26_00453at 487.102 kb on + strand, within MPMX26_00453at 487.104 kb on + strandat 487.112 kb on + strandat 487.112 kb on + strandat 487.112 kb on + strandat 487.112 kb on + strandat 487.112 kb on + strandat 487.112 kb on + strandat 487.114 kb on + strandat 487.114 kb on + strandat 487.298 kb on - strand, within MPMX26_00454at 487.308 kb on - strand, within MPMX26_00454at 487.316 kb on - strand, within MPMX26_00454at 487.459 kb on - strand, within MPMX26_00454at 487.534 kb on - strand, within MPMX26_00454at 487.536 kb on - strand, within MPMX26_00454at 487.547 kb on - strand, within MPMX26_00454at 487.591 kb on - strand, within MPMX26_00454at 487.641 kb on - strand, within MPMX26_00454at 487.658 kb on - strand, within MPMX26_00454at 487.720 kb on - strand, within MPMX26_00454at 487.804 kb on - strand, within MPMX26_00454at 487.937 kb on - strand, within MPMX26_00454at 487.952 kb on - strand, within MPMX26_00454at 487.952 kb on - strand, within MPMX26_00454at 487.952 kb on - strand, within MPMX26_00454at 487.952 kb on - strand, within MPMX26_00454at 487.978 kb on - strand, within MPMX26_00454at 487.978 kb on - strand, within MPMX26_00454at 487.978 kb on - strand, within MPMX26_00454at 487.978 kb on - strand, within MPMX26_00454at 488.086 kb on - strand, within MPMX26_00454at 488.093 kb on - strand, within MPMX26_00454at 488.149 kb on - strandat 488.256 kb on - strandat 488.281 kb on - strandat 488.301 kb on - strandat 488.301 kb on - strandat 488.301 kb on - strandat 488.311 kb on - strandat 488.327 kb on - strandat 488.337 kb on - strandat 488.465 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.544 kb on - strand, within MPMX26_00455at 488.547 kb on - strand, within MPMX26_00455at 488.590 kb on - strand, within MPMX26_00455at 488.590 kb on - strand, within MPMX26_00455at 488.590 kb on - strand, within MPMX26_00455at 488.614 kb on - strand, within MPMX26_00455at 488.618 kb on - strand, within MPMX26_00455at 488.630 kb on - strand, within MPMX26_00455at 488.640 kb on - strand, within MPMX26_00455at 488.659 kb on - strand, within MPMX26_00455at 488.779 kb on - strand, within MPMX26_00455at 489.017 kb on - strand, within MPMX26_00455at 489.060 kb on - strand, within MPMX26_00455

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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486,199 + MPMX26_00452 0.53 +0.8
486,253 + MPMX26_00452 0.59 -0.4
486,253 + MPMX26_00452 0.59 +0.2
486,253 + MPMX26_00452 0.59 +0.3
486,254 + MPMX26_00452 0.59 +0.1
486,277 + MPMX26_00452 0.62 -0.3
486,277 + MPMX26_00452 0.62 -0.4
486,336 + MPMX26_00452 0.68 +0.2
486,385 + MPMX26_00452 0.74 +0.1
486,416 + MPMX26_00452 0.77 +0.6
486,455 + MPMX26_00452 0.82 -1.3
486,545 + +0.0
486,575 + +0.3
486,693 + MPMX26_00453 0.15 +2.0
486,693 + MPMX26_00453 0.15 +2.0
486,708 + MPMX26_00453 0.18 +0.7
486,788 + MPMX26_00453 0.33 +1.8
486,838 + MPMX26_00453 0.42 +1.9
486,843 + MPMX26_00453 0.43 +2.2
486,843 + MPMX26_00453 0.43 +1.8
486,848 + MPMX26_00453 0.43 +1.7
486,848 + MPMX26_00453 0.43 +2.3
486,848 + MPMX26_00453 0.43 +1.9
486,892 + MPMX26_00453 0.51 +2.3
486,908 + MPMX26_00453 0.54 +2.0
486,913 + MPMX26_00453 0.55 +1.9
486,918 + MPMX26_00453 0.56 +2.2
486,918 + MPMX26_00453 0.56 +1.5
486,918 + MPMX26_00453 0.56 +2.4
486,918 + MPMX26_00453 0.56 +2.4
486,918 + MPMX26_00453 0.56 +1.9
486,918 + MPMX26_00453 0.56 +1.8
486,918 + MPMX26_00453 0.56 +1.8
486,918 + MPMX26_00453 0.56 +2.2
486,918 + MPMX26_00453 0.56 +1.9
486,918 + MPMX26_00453 0.56 +2.1
486,918 + MPMX26_00453 0.56 +2.2
486,920 + MPMX26_00453 0.57 +2.3
486,920 + MPMX26_00453 0.57 +1.8
486,920 + MPMX26_00453 0.57 +2.0
486,920 + MPMX26_00453 0.57 +2.2
486,966 + MPMX26_00453 0.65 +2.4
486,966 + MPMX26_00453 0.65 +2.1
486,987 + MPMX26_00453 0.69 +1.8
486,989 + MPMX26_00453 0.69 +1.9
486,989 + MPMX26_00453 0.69 +2.0
487,020 + MPMX26_00453 0.75 +1.9
487,068 + MPMX26_00453 0.83 +1.8
487,068 + MPMX26_00453 0.83 +2.2
487,068 + MPMX26_00453 0.83 +1.7
487,068 + MPMX26_00453 0.83 +2.0
487,068 + MPMX26_00453 0.83 +1.7
487,102 + MPMX26_00453 0.89 +2.5
487,104 + +1.2
487,112 + +2.2
487,112 + +2.7
487,112 + +1.7
487,112 + +2.1
487,112 + +2.5
487,112 + +1.8
487,114 + +1.9
487,114 + +1.9
487,298 - MPMX26_00454 0.11 +0.1
487,308 - MPMX26_00454 0.12 +0.5
487,316 - MPMX26_00454 0.13 -0.5
487,459 - MPMX26_00454 0.27 -0.2
487,534 - MPMX26_00454 0.34 +0.0
487,536 - MPMX26_00454 0.34 -0.8
487,547 - MPMX26_00454 0.35 +0.7
487,591 - MPMX26_00454 0.40 +0.5
487,641 - MPMX26_00454 0.45 +0.6
487,658 - MPMX26_00454 0.46 +1.1
487,720 - MPMX26_00454 0.52 -0.4
487,804 - MPMX26_00454 0.60 -0.7
487,937 - MPMX26_00454 0.74 +0.3
487,952 - MPMX26_00454 0.75 -0.9
487,952 - MPMX26_00454 0.75 -0.2
487,952 - MPMX26_00454 0.75 -1.1
487,952 - MPMX26_00454 0.75 +0.0
487,978 - MPMX26_00454 0.78 +0.5
487,978 - MPMX26_00454 0.78 +0.5
487,978 - MPMX26_00454 0.78 +0.2
487,978 - MPMX26_00454 0.78 -0.2
488,086 - MPMX26_00454 0.88 -0.4
488,093 - MPMX26_00454 0.89 +0.1
488,149 - -0.1
488,256 - -0.6
488,281 - -0.2
488,301 - -0.1
488,301 - -0.5
488,301 - +0.0
488,311 - +0.2
488,327 - +0.7
488,337 - -1.1
488,465 - MPMX26_00455 0.24 +0.6
488,544 - MPMX26_00455 0.32 -0.5
488,544 - MPMX26_00455 0.32 +0.4
488,544 - MPMX26_00455 0.32 +0.2
488,544 - MPMX26_00455 0.32 +0.3
488,544 - MPMX26_00455 0.32 -0.6
488,544 - MPMX26_00455 0.32 -0.2
488,544 - MPMX26_00455 0.32 -0.3
488,544 - MPMX26_00455 0.32 -0.3
488,544 - MPMX26_00455 0.32 -1.3
488,547 - MPMX26_00455 0.32 -3.3
488,590 - MPMX26_00455 0.37 -0.6
488,590 - MPMX26_00455 0.37 -0.1
488,590 - MPMX26_00455 0.37 -1.3
488,614 - MPMX26_00455 0.39 -0.3
488,618 - MPMX26_00455 0.40 -0.0
488,630 - MPMX26_00455 0.41 -0.3
488,640 - MPMX26_00455 0.42 -0.1
488,659 - MPMX26_00455 0.44 -0.1
488,779 - MPMX26_00455 0.57 +0.1
489,017 - MPMX26_00455 0.82 +0.0
489,060 - MPMX26_00455 0.87 -0.4

Or see this region's nucleotide sequence