Strain Fitness in Acinetobacter radioresistens SK82 around MPMX26_00162

Experiment: L-Serine (N)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX26_00161 and MPMX26_00162 are separated by 0 nucleotidesMPMX26_00162 and MPMX26_00163 are separated by 24 nucleotides MPMX26_00161: MPMX26_00161 - putative CtpA-like serine protease, at 173,831 to 175,018 _00161 MPMX26_00162: MPMX26_00162 - Regulatory protein AtoC, at 175,019 to 176,434 _00162 MPMX26_00163: MPMX26_00163 - Adaptive-response sensory-kinase SasA, at 176,459 to 178,024 _00163 Position (kb) 175 176 177Strain fitness (log2 ratio) -3 -2 -1 0 1at 175.000 kb on - strandat 175.037 kb on - strandat 175.037 kb on - strandat 175.117 kb on - strandat 175.117 kb on - strandat 175.119 kb on + strandat 175.125 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.127 kb on - strandat 175.132 kb on - strandat 175.132 kb on - strandat 175.132 kb on - strandat 175.132 kb on - strandat 175.132 kb on - strandat 175.137 kb on - strandat 175.144 kb on - strandat 175.234 kb on - strand, within MPMX26_00162at 175.287 kb on - strand, within MPMX26_00162at 175.287 kb on - strand, within MPMX26_00162at 175.287 kb on - strand, within MPMX26_00162at 175.294 kb on - strand, within MPMX26_00162at 175.365 kb on - strand, within MPMX26_00162at 175.502 kb on - strand, within MPMX26_00162at 175.517 kb on - strand, within MPMX26_00162at 175.594 kb on - strand, within MPMX26_00162at 175.688 kb on - strand, within MPMX26_00162at 175.688 kb on - strand, within MPMX26_00162at 175.703 kb on - strand, within MPMX26_00162at 175.703 kb on - strand, within MPMX26_00162at 175.703 kb on - strand, within MPMX26_00162at 175.754 kb on - strand, within MPMX26_00162at 175.754 kb on - strand, within MPMX26_00162at 175.774 kb on - strand, within MPMX26_00162at 175.774 kb on - strand, within MPMX26_00162at 175.774 kb on - strand, within MPMX26_00162at 175.774 kb on - strand, within MPMX26_00162at 175.823 kb on - strand, within MPMX26_00162at 175.837 kb on - strand, within MPMX26_00162at 175.837 kb on - strand, within MPMX26_00162at 175.855 kb on - strand, within MPMX26_00162at 175.877 kb on - strand, within MPMX26_00162at 175.904 kb on - strand, within MPMX26_00162at 175.904 kb on - strand, within MPMX26_00162at 175.918 kb on - strand, within MPMX26_00162at 175.918 kb on - strand, within MPMX26_00162at 175.918 kb on - strand, within MPMX26_00162at 175.918 kb on - strand, within MPMX26_00162at 175.918 kb on - strand, within MPMX26_00162at 175.918 kb on - strand, within MPMX26_00162at 175.918 kb on - strand, within MPMX26_00162at 175.918 kb on - strand, within MPMX26_00162at 175.943 kb on - strand, within MPMX26_00162at 175.945 kb on - strand, within MPMX26_00162at 175.945 kb on - strand, within MPMX26_00162at 175.956 kb on - strand, within MPMX26_00162at 176.015 kb on - strand, within MPMX26_00162at 176.044 kb on - strand, within MPMX26_00162at 176.066 kb on - strand, within MPMX26_00162at 176.072 kb on - strand, within MPMX26_00162at 176.072 kb on - strand, within MPMX26_00162at 176.075 kb on - strand, within MPMX26_00162at 176.087 kb on - strand, within MPMX26_00162at 176.110 kb on - strand, within MPMX26_00162at 176.216 kb on - strand, within MPMX26_00162at 176.238 kb on - strand, within MPMX26_00162at 176.264 kb on - strand, within MPMX26_00162at 176.269 kb on - strand, within MPMX26_00162at 176.387 kb on - strandat 176.387 kb on - strandat 176.582 kb on - strandat 176.911 kb on - strand, within MPMX26_00163at 176.923 kb on - strand, within MPMX26_00163at 176.923 kb on - strand, within MPMX26_00163at 177.157 kb on - strand, within MPMX26_00163at 177.157 kb on - strand, within MPMX26_00163at 177.203 kb on - strand, within MPMX26_00163at 177.238 kb on - strand, within MPMX26_00163at 177.238 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.272 kb on - strand, within MPMX26_00163at 177.275 kb on - strand, within MPMX26_00163at 177.277 kb on - strand, within MPMX26_00163at 177.277 kb on - strand, within MPMX26_00163at 177.282 kb on - strand, within MPMX26_00163at 177.342 kb on - strand, within MPMX26_00163

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Per-strain Table

Position Strand Gene LocusTag Fraction L-Serine (N)
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175,000 - -2.7
175,037 - -0.2
175,037 - -0.3
175,117 - -1.5
175,117 - -2.0
175,119 + -1.0
175,125 - -0.7
175,127 - -1.1
175,127 - -0.9
175,127 - -0.3
175,127 - -2.0
175,127 - -1.7
175,127 - -1.4
175,127 - -0.5
175,127 - -0.7
175,127 - -1.5
175,127 - -2.0
175,127 - -0.5
175,127 - -0.8
175,127 - -3.5
175,127 - -0.7
175,132 - -1.8
175,132 - -1.1
175,132 - -0.6
175,132 - -1.2
175,132 - -1.5
175,137 - +0.5
175,144 - -0.5
175,234 - MPMX26_00162 0.15 -1.1
175,287 - MPMX26_00162 0.19 -0.5
175,287 - MPMX26_00162 0.19 -1.3
175,287 - MPMX26_00162 0.19 +0.2
175,294 - MPMX26_00162 0.19 -0.7
175,365 - MPMX26_00162 0.24 -0.3
175,502 - MPMX26_00162 0.34 -1.4
175,517 - MPMX26_00162 0.35 -0.7
175,594 - MPMX26_00162 0.41 -0.6
175,688 - MPMX26_00162 0.47 -1.7
175,688 - MPMX26_00162 0.47 -1.2
175,703 - MPMX26_00162 0.48 -0.5
175,703 - MPMX26_00162 0.48 -0.6
175,703 - MPMX26_00162 0.48 -1.3
175,754 - MPMX26_00162 0.52 +0.2
175,754 - MPMX26_00162 0.52 -0.3
175,774 - MPMX26_00162 0.53 -2.9
175,774 - MPMX26_00162 0.53 -1.3
175,774 - MPMX26_00162 0.53 -0.8
175,774 - MPMX26_00162 0.53 -0.5
175,823 - MPMX26_00162 0.57 -1.5
175,837 - MPMX26_00162 0.58 -0.3
175,837 - MPMX26_00162 0.58 -0.3
175,855 - MPMX26_00162 0.59 -0.6
175,877 - MPMX26_00162 0.61 -1.1
175,904 - MPMX26_00162 0.62 -1.5
175,904 - MPMX26_00162 0.62 -0.2
175,918 - MPMX26_00162 0.63 -1.4
175,918 - MPMX26_00162 0.63 -0.6
175,918 - MPMX26_00162 0.63 -1.0
175,918 - MPMX26_00162 0.63 -1.0
175,918 - MPMX26_00162 0.63 -0.7
175,918 - MPMX26_00162 0.63 -1.6
175,918 - MPMX26_00162 0.63 -0.9
175,918 - MPMX26_00162 0.63 +0.6
175,943 - MPMX26_00162 0.65 -0.6
175,945 - MPMX26_00162 0.65 -1.8
175,945 - MPMX26_00162 0.65 -1.4
175,956 - MPMX26_00162 0.66 -0.2
176,015 - MPMX26_00162 0.70 -1.3
176,044 - MPMX26_00162 0.72 -2.6
176,066 - MPMX26_00162 0.74 -1.4
176,072 - MPMX26_00162 0.74 -0.6
176,072 - MPMX26_00162 0.74 -1.9
176,075 - MPMX26_00162 0.75 -0.5
176,087 - MPMX26_00162 0.75 +0.1
176,110 - MPMX26_00162 0.77 -1.6
176,216 - MPMX26_00162 0.85 -0.1
176,238 - MPMX26_00162 0.86 +0.3
176,264 - MPMX26_00162 0.88 -1.4
176,269 - MPMX26_00162 0.88 -1.3
176,387 - -0.7
176,387 - -0.4
176,582 - -2.3
176,911 - MPMX26_00163 0.29 +0.2
176,923 - MPMX26_00163 0.30 +0.1
176,923 - MPMX26_00163 0.30 -0.3
177,157 - MPMX26_00163 0.45 -1.3
177,157 - MPMX26_00163 0.45 -0.6
177,203 - MPMX26_00163 0.48 -3.3
177,238 - MPMX26_00163 0.50 -2.2
177,238 - MPMX26_00163 0.50 -1.7
177,272 - MPMX26_00163 0.52 -1.5
177,272 - MPMX26_00163 0.52 -1.4
177,272 - MPMX26_00163 0.52 -1.5
177,272 - MPMX26_00163 0.52 -1.0
177,272 - MPMX26_00163 0.52 -1.1
177,275 - MPMX26_00163 0.52 -2.2
177,277 - MPMX26_00163 0.52 -1.5
177,277 - MPMX26_00163 0.52 -0.7
177,282 - MPMX26_00163 0.53 -1.7
177,342 - MPMX26_00163 0.56 -0.7

Or see this region's nucleotide sequence