Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5823

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
17,027	-		GFF5822	0.60	-0.3
18,579	-				+0.5
18,579	-				+0.5
18,579	-				-1.3
19,077	+		GFF5824	0.30	-0.1
19,266	+		GFF5824	0.45	-0.7
19,342	+		GFF5824	0.51	+0.7
19,362	+		GFF5824	0.52	+0.2
19,363	-		GFF5824	0.53	-0.1
19,363	-		GFF5824	0.53	-0.2
19,413	+		GFF5824	0.56	+0.3
19,414	-		GFF5824	0.56	-0.9