Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5783

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,810,586	+		GFF5782	0.23	-0.0
2,810,587	-		GFF5782	0.24	-1.0
2,810,587	-		GFF5782	0.24	+1.2
2,810,645	+		GFF5782	0.32	+0.2
2,810,667	-		GFF5782	0.36	+0.2
2,810,667	-		GFF5782	0.36	-0.1
2,810,744	+		GFF5782	0.47	+0.0
2,810,744	+		GFF5782	0.47	+0.3
2,810,745	-		GFF5782	0.47	-0.2
2,810,843	+		GFF5782	0.62	-0.0
2,810,844	-		GFF5782	0.62	+0.0
2,810,844	-		GFF5782	0.62	-2.4
2,810,844	-		GFF5782	0.62	+0.2
2,810,909	+		GFF5782	0.72	+0.4
2,810,909	+		GFF5782	0.72	+0.3
2,810,910	-		GFF5782	0.72	+0.1
2,810,910	-		GFF5782	0.72	+0.1
2,810,910	-		GFF5782	0.72	+0.4
2,811,172	+				+0.2
2,811,173	-				-0.7
2,811,278	-				+0.2
2,811,332	-				-0.1
2,811,440	+				-0.1
2,811,518	-				+1.2
2,811,676	+		GFF5783	0.52	+0.7
2,811,677	-		GFF5783	0.52	+0.7
2,811,677	-		GFF5783	0.52	+1.1
2,811,827	-				+0.0
2,811,853	-				+1.4
2,811,853	-				-0.4
2,811,853	-				-0.0
2,812,105	+				+0.1
2,812,105	+				-0.7
2,812,105	+				+0.6
2,812,105	+				-0.7
2,812,105	+				+0.5
2,812,105	+				+0.3
2,812,105	+				-0.3
2,812,105	+				-0.3
2,812,105	+				-0.4
2,812,105	+				-0.1
2,812,105	+				+0.1
2,812,162	+				-0.0
2,812,162	+				+0.8
2,812,163	-				+0.9
2,812,453	+		GFF5785	0.29	-0.2
2,812,453	+		GFF5785	0.29	-3.3
2,812,454	-		GFF5785	0.29	-1.2
2,812,573	+		GFF5785	0.36	+1.6
2,812,574	-		GFF5785	0.36	-0.6
2,812,582	+		GFF5785	0.37	+0.4
2,812,582	+		GFF5785	0.37	+0.6
2,812,582	+		GFF5785	0.37	-0.4
2,812,582	+		GFF5785	0.37	-0.1
2,812,583	-		GFF5785	0.37	-0.2
2,812,583	-		GFF5785	0.37	-0.1
2,812,696	+		GFF5785	0.44	+0.2
2,812,702	+		GFF5785	0.45	-0.6
2,812,702	+		GFF5785	0.45	+0.6
2,812,702	+		GFF5785	0.45	-0.2
2,812,703	-		GFF5785	0.45	+0.3
2,812,756	+		GFF5785	0.48	+0.8
2,812,756	+		GFF5785	0.48	-0.7
2,812,757	-		GFF5785	0.48	-0.1
2,812,757	-		GFF5785	0.48	-0.1
2,812,757	-		GFF5785	0.48	-2.5
2,812,757	-		GFF5785	0.48	-0.2
2,812,757	-		GFF5785	0.48	+0.0
2,812,757	-		GFF5785	0.48	-0.2
2,812,757	-		GFF5785	0.48	+0.4
2,812,757	-		GFF5785	0.48	-0.5
2,812,789	+		GFF5785	0.50	-0.4
2,812,789	+		GFF5785	0.50	-0.3
2,812,789	+		GFF5785	0.50	+0.2
2,812,790	-		GFF5785	0.50	-0.4
2,812,790	-		GFF5785	0.50	-0.2
2,812,790	-		GFF5785	0.50	-0.9
2,812,795	+		GFF5785	0.51	-0.2
2,812,795	+		GFF5785	0.51	+0.6
2,812,795	+		GFF5785	0.51	-0.9
2,812,795	+		GFF5785	0.51	-0.2
2,812,796	-		GFF5785	0.51	-0.0
2,812,796	-		GFF5785	0.51	-0.1
2,812,796	-		GFF5785	0.51	-0.1
2,812,796	-		GFF5785	0.51	-0.6