Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5705

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,727,986	-				-0.6
2,728,104	+				+1.3
2,728,105	-				-0.0
2,728,120	+				-1.1
2,728,120	+				+0.2
2,728,121	-				+0.0
2,728,121	-				-1.8
2,728,237	+				+0.3
2,728,422	+				-0.0
2,728,422	+				+0.3
2,728,423	-				+0.6
2,728,550	+				-0.3
2,728,654	+				-0.3
2,728,654	+				+0.2
2,728,654	+				-0.2
2,728,655	-				+0.1
2,728,655	-				+0.1
2,728,685	+				-0.0
2,728,757	-				-0.3
2,728,757	-				+0.4
2,728,757	-				+1.2
2,729,387	+		GFF5705	0.67	+0.6
2,729,387	+		GFF5705	0.67	+1.0
2,729,387	+		GFF5705	0.67	+0.0
2,729,387	+		GFF5705	0.67	+0.7
2,729,387	+		GFF5705	0.67	+0.1
2,729,387	+		GFF5705	0.67	+0.3
2,729,387	+		GFF5705	0.67	+0.9
2,729,388	-		GFF5705	0.68	+0.3
2,729,388	-		GFF5705	0.68	+0.5
2,729,388	-		GFF5705	0.68	+0.0
2,729,388	-		GFF5705	0.68	+0.7
2,729,388	-		GFF5705	0.68	+0.2
2,729,388	-		GFF5705	0.68	+0.7
2,729,388	-		GFF5705	0.68	+0.3
2,729,388	-		GFF5705	0.68	+0.3
2,729,388	-		GFF5705	0.68	+0.9
2,729,668	+				+1.3
2,729,668	+				+0.2
2,729,668	+				+0.8
2,729,668	+				+0.2
2,729,669	-				-0.5
2,729,669	-				+0.1
2,729,669	-				+1.0
2,729,669	-				-0.1
2,729,701	+				-0.1
2,729,701	+				+1.0
2,729,701	+				+0.4
2,729,701	+				+0.3
2,729,701	+				+0.3
2,729,701	+				+0.6
2,729,702	-				+0.4
2,729,702	-				+1.0
2,729,702	-				-0.1
2,729,702	-				-0.4
2,729,702	-				-0.3
2,729,702	-				+0.2
2,729,838	-				+0.3