Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5647

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,669,304	+		GFF5646	0.30	-0.4
2,669,703	+		GFF5646	0.61	+0.5
2,670,172	+				+0.5
2,670,319	-				-1.7
2,670,438	+		GFF5647	0.24	+0.9
2,670,439	-		GFF5647	0.24	+0.2
2,670,439	-		GFF5647	0.24	-0.0
2,670,471	+		GFF5647	0.30	+0.9
2,670,750	-		GFF5647	0.76	+0.3
2,671,201	+		GFF5648	0.19	-0.1
2,671,277	-		GFF5648	0.24	-0.3
2,671,637	-		GFF5648	0.47	-0.3
2,671,858	+		GFF5648	0.61	+1.1
2,671,859	-		GFF5648	0.61	+0.0