Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5467

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,468,886	+		GFF5466	0.27	+0.1
2,468,887	-		GFF5466	0.27	-0.2
2,469,114	+		GFF5466	0.50	-0.7
2,469,115	-		GFF5466	0.50	+0.1
2,469,115	-		GFF5466	0.50	+0.5
2,469,115	-		GFF5466	0.50	-0.9
2,469,115	-		GFF5466	0.50	+1.5
2,469,166	-		GFF5466	0.56	+0.0
2,469,372	+		GFF5466	0.77	-0.2
2,469,373	-		GFF5466	0.77	-1.7
2,469,597	+				-0.4
2,469,955	+		GFF5467	0.50	+0.6
2,470,386	+		GFF5468	0.11	+1.6
2,471,172	+		GFF5468	0.89	+0.5
2,471,172	+		GFF5468	0.89	-0.2
2,471,173	-		GFF5468	0.89	-1.1