Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5396

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,400,388	+				+0.2
2,400,389	-				-2.4
2,400,389	-				-0.8
2,400,922	-		GFF5396	0.28	+0.6
2,401,143	+		GFF5396	0.53	+0.8
2,401,144	-		GFF5396	0.54	+0.8
2,401,186	-		GFF5396	0.58	+0.3
2,401,644	-		GFF5397	0.17	+0.1
2,401,688	+		GFF5397	0.26	+0.2
2,401,689	-		GFF5397	0.27	-0.3
2,402,304	+				+3.3
2,402,330	+				+4.0