Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5386

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,388,743	+				-0.3
2,388,743	+				-0.1
2,388,818	+				+1.2
2,388,818	+				-0.4
2,388,818	+				-1.7
2,388,819	-				+1.3
2,388,843	-				-1.2
2,388,879	-				+0.1
2,389,203	-		GFF5386	0.30	+0.7
2,389,716	-		GFF5386	0.65	-0.2
2,389,927	+		GFF5386	0.80	+0.7
2,390,109	-				+1.8
2,390,220	+				+0.0
2,390,220	+				+0.6
2,390,221	-				+0.1
2,390,221	-				+0.6
2,390,524	-		GFF5387	0.39	-0.2
2,390,805	+		GFF5387	0.77	-0.7
2,390,805	+		GFF5387	0.77	+1.2