Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5367

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,368,348	+		GFF5366	0.31	+0.1
2,368,349	-		GFF5366	0.31	+0.1
2,368,532	-		GFF5366	0.47	+0.8
2,368,534	+		GFF5366	0.48	+0.9
2,368,655	-		GFF5366	0.58	+0.3
2,368,744	+		GFF5366	0.67	+0.0
2,368,745	-		GFF5366	0.67	+0.3
2,368,745	-		GFF5366	0.67	+0.1
2,368,775	+		GFF5366	0.69	-1.1
2,368,776	-		GFF5366	0.69	+0.9
2,368,868	-		GFF5366	0.78	-0.1
2,368,939	+		GFF5366	0.84	-0.2
2,368,940	-		GFF5366	0.84	-0.2
2,368,975	+		GFF5366	0.88	+1.3
2,368,975	+		GFF5366	0.88	-0.6
2,368,976	-		GFF5366	0.88	-0.4
2,368,976	-		GFF5366	0.88	-0.0
2,369,232	+				-0.8
2,369,233	-				+1.4
2,369,241	+				-0.2
2,369,241	+				-0.2
2,369,242	-				-0.5
2,369,242	-				+0.2
2,369,242	-				-0.3
2,369,390	+		GFF5367	0.13	+1.3
2,369,448	-		GFF5367	0.25	+0.1
2,369,825	-				-1.3
2,370,220	+		GFF5368	0.43	+1.1
2,370,799	+				+0.9