Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF5083

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
2,097,157	-		GFF5081	0.34	-0.4
2,097,159	-		GFF5081	0.34	+0.2
2,097,163	-		GFF5081	0.36	+0.1
2,097,163	-		GFF5081	0.36	+0.2
2,097,201	+		GFF5081	0.50	-0.1
2,097,201	+		GFF5081	0.50	-0.2
2,097,332	-				-2.6
2,098,097	+		GFF5083	0.23	-0.5
2,098,098	-		GFF5083	0.24	-0.2
2,098,146	+		GFF5083	0.29	-1.0
2,098,557	-		GFF5083	0.73	-0.1
2,098,662	-		GFF5083	0.85	-0.2
2,099,083	+		GFF5084	0.25	-0.4
2,099,083	+		GFF5084	0.25	-0.2
2,099,084	-		GFF5084	0.25	-0.8
2,099,113	+		GFF5084	0.28	-0.3
2,099,687	-		GFF5084	0.90	+0.6
2,099,773	+				+1.2
2,099,773	+				-0.8
2,099,773	+				+0.3
2,099,774	-				-0.2