Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4923

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,937,259	+		GFF4921	0.74	+0.8
1,937,332	-		GFF4921	0.77	-1.3
1,937,332	-		GFF4921	0.77	+0.3
1,937,490	+		GFF4921	0.84	-0.1
1,937,491	-		GFF4921	0.84	+0.3
1,937,491	-		GFF4921	0.84	+1.5
1,937,491	-		GFF4921	0.84	+0.5
1,937,574	+		GFF4921	0.88	-0.1
1,937,574	+		GFF4921	0.88	+0.1
1,937,574	+		GFF4921	0.88	-0.9
1,937,574	+		GFF4921	0.88	+0.4
1,937,575	-		GFF4921	0.88	-1.1
1,937,575	-		GFF4921	0.88	+0.2
1,937,856	+		GFF4922	0.19	-1.3
1,937,856	+		GFF4922	0.19	-1.7
1,937,856	+		GFF4922	0.19	+0.5
1,937,856	+		GFF4922	0.19	+0.9
1,937,856	+		GFF4922	0.19	-0.4
1,937,856	+		GFF4922	0.19	+0.2
1,937,856	+		GFF4922	0.19	+0.2
1,937,856	+		GFF4922	0.19	+0.2
1,937,856	+		GFF4922	0.19	+0.2
1,937,856	+		GFF4922	0.19	-1.6
1,937,857	-		GFF4922	0.19	-0.2
1,937,857	-		GFF4922	0.19	+0.1
1,937,857	-		GFF4922	0.19	-0.4
1,937,857	-		GFF4922	0.19	+0.1
1,937,857	-		GFF4922	0.19	-0.3
1,937,928	+		GFF4922	0.58	+0.3
1,937,928	+		GFF4922	0.58	-0.6
1,938,392	+		GFF4923	0.10	-0.8
1,938,393	-		GFF4923	0.10	-2.2
1,938,594	-		GFF4923	0.25	+0.0
1,938,653	-		GFF4923	0.29	-0.4
1,938,879	-		GFF4923	0.45	-2.6
1,938,884	+		GFF4923	0.46	-0.1
1,938,885	-		GFF4923	0.46	-0.4
1,938,885	-		GFF4923	0.46	-0.6
1,938,890	+		GFF4923	0.46	-0.9
1,938,890	+		GFF4923	0.46	+0.3
1,938,890	+		GFF4923	0.46	-0.3
1,938,890	+		GFF4923	0.46	-0.7
1,938,891	-		GFF4923	0.46	-0.1
1,938,891	-		GFF4923	0.46	-0.8
1,938,914	+		GFF4923	0.48	+0.7
1,938,915	-		GFF4923	0.48	-0.5
1,938,915	-		GFF4923	0.48	-0.8
1,938,998	+		GFF4923	0.54	+0.7
1,938,998	+		GFF4923	0.54	+0.3
1,938,999	-		GFF4923	0.54	+0.2
1,938,999	-		GFF4923	0.54	-0.1
1,938,999	-		GFF4923	0.54	-0.2
1,939,017	-		GFF4923	0.55	-0.3
1,939,184	+		GFF4923	0.67	-0.2
1,939,185	-		GFF4923	0.67	-0.8
1,939,185	-		GFF4923	0.67	-0.5
1,939,190	+		GFF4923	0.68	+0.1
1,939,190	+		GFF4923	0.68	-0.5
1,939,190	+		GFF4923	0.68	-0.8
1,939,190	+		GFF4923	0.68	+0.9
1,939,191	-		GFF4923	0.68	-0.8
1,939,191	-		GFF4923	0.68	+0.2
1,939,191	-		GFF4923	0.68	-1.2
1,939,191	-		GFF4923	0.68	-0.4
1,939,518	-				+0.0
1,939,684	+				-0.3
1,939,684	+				+0.4
1,939,685	-				-1.5
1,939,685	-				-1.5
1,939,777	+		GFF4924	0.17	-0.6
1,939,777	+		GFF4924	0.17	-0.4
1,939,777	+		GFF4924	0.17	+0.4
1,939,777	+		GFF4924	0.17	-0.1
1,939,777	+		GFF4924	0.17	-0.9
1,939,777	+		GFF4924	0.17	-0.1
1,939,777	+		GFF4924	0.17	-2.2
1,939,777	+		GFF4924	0.17	+0.5
1,939,777	+		GFF4924	0.17	+0.2
1,939,778	-		GFF4924	0.17	-0.5
1,939,778	-		GFF4924	0.17	-0.5
1,939,912	+		GFF4924	0.42	-0.7
1,939,912	+		GFF4924	0.42	-3.2
1,939,912	+		GFF4924	0.42	-1.5
1,939,912	+		GFF4924	0.42	-1.2
1,939,912	+		GFF4924	0.42	+0.1
1,939,913	-		GFF4924	0.42	-1.1
1,939,945	+		GFF4924	0.48	+1.5
1,939,946	-		GFF4924	0.48	-1.3
1,940,122	+		GFF4924	0.81	-2.1
1,940,122	+		GFF4924	0.81	-1.8
1,940,123	-		GFF4924	0.81	-0.8
1,940,143	+		GFF4924	0.85	-1.4
1,940,143	+		GFF4924	0.85	-2.0
1,940,144	-		GFF4924	0.85	+0.5
1,940,162	-		GFF4924	0.88	-2.3
1,940,293	+				+0.2
1,940,516	-				-0.1
1,940,541	+				+0.2
1,940,541	+				-0.1
1,940,541	+				+1.5
1,940,541	+				+0.3
1,940,542	-				+0.1
1,940,542	-				-0.5
1,940,542	-				-0.3