Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4784

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,793,057	+				+1.0
1,793,057	+				+1.1
1,793,057	+				+0.1
1,793,058	-				-0.1
1,793,777	+		GFF4784	0.24	+0.3
1,793,783	+		GFF4784	0.25	+0.4
1,793,784	-		GFF4784	0.25	+0.9
1,794,511	+		GFF4785	0.10	-0.5
1,794,511	+		GFF4785	0.10	-0.6
1,794,512	-		GFF4785	0.10	+0.0
1,794,512	-		GFF4785	0.10	-0.3
1,794,664	+		GFF4785	0.17	+0.2
1,794,664	+		GFF4785	0.17	-0.2
1,794,664	+		GFF4785	0.17	-0.5
1,794,730	+		GFF4785	0.21	+0.0
1,794,731	-		GFF4785	0.21	+0.1
1,794,802	+		GFF4785	0.24	+1.2
1,794,802	+		GFF4785	0.24	+0.7
1,794,802	+		GFF4785	0.24	-0.0
1,794,803	-		GFF4785	0.24	+0.3
1,794,803	-		GFF4785	0.24	-0.0
1,794,803	-		GFF4785	0.24	+0.1
1,794,841	+		GFF4785	0.26	-0.4
1,794,842	-		GFF4785	0.26	+0.4
1,794,992	-		GFF4785	0.33	+1.1
1,795,180	+		GFF4785	0.43	+0.4
1,795,180	+		GFF4785	0.43	+0.2
1,795,181	-		GFF4785	0.43	-0.1
1,795,181	-		GFF4785	0.43	+0.2
1,795,181	-		GFF4785	0.43	+0.0
1,795,181	-		GFF4785	0.43	-0.5
1,795,181	-		GFF4785	0.43	+0.4
1,795,181	-		GFF4785	0.43	+1.2