Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4680

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,629,666	+				-2.0
1,629,667	-				-0.1
1,629,667	-				+0.8
1,629,830	+				-0.2
1,629,830	+				-0.1
1,629,996	-		GFF4679	0.27	-0.5
1,631,085	+		GFF4680	0.45	+0.3
1,631,100	+		GFF4680	0.47	+0.1
1,631,101	-		GFF4680	0.47	+0.2
1,631,101	-		GFF4680	0.47	+0.1
1,631,118	+		GFF4680	0.49	-1.8
1,631,119	-		GFF4680	0.49	+0.5
1,631,119	-		GFF4680	0.49	+0.1
1,631,124	+		GFF4680	0.49	-0.3
1,631,249	+		GFF4680	0.61	-1.0
1,631,250	+		GFF4680	0.61	-0.8
1,631,250	+		GFF4680	0.61	-1.0
1,631,340	+		GFF4680	0.70	+0.1
1,631,340	+		GFF4680	0.70	-0.3
1,631,340	+		GFF4680	0.70	+0.7
1,631,341	-		GFF4680	0.70	-0.5
1,631,418	+		GFF4680	0.77	-0.4
1,631,418	+		GFF4680	0.77	-0.8
1,631,419	-		GFF4680	0.77	-0.9
1,631,419	-		GFF4680	0.77	-0.0
1,631,478	+		GFF4680	0.83	-1.1
1,632,165	+		GFF4681	0.64	-1.3
1,632,166	-		GFF4681	0.65	+0.1
1,632,184	+		GFF4681	0.67	-0.1
1,632,184	+		GFF4681	0.67	+0.4
1,632,185	-		GFF4681	0.67	-0.0
1,632,185	-		GFF4681	0.67	-0.4
1,632,223	+		GFF4681	0.72	+0.7
1,632,223	+		GFF4681	0.72	-0.6
1,632,224	-		GFF4681	0.72	-1.1
1,632,224	-		GFF4681	0.72	-0.5
1,632,224	-		GFF4681	0.72	-0.1
1,632,224	-		GFF4681	0.72	+0.5
1,632,298	+		GFF4681	0.82	-0.1
1,632,298	+		GFF4681	0.82	-0.7
1,632,298	+		GFF4681	0.82	-0.5
1,632,298	+		GFF4681	0.82	+0.5
1,632,298	+		GFF4681	0.82	-0.2
1,632,298	+		GFF4681	0.82	-0.3
1,632,298	+		GFF4681	0.82	+0.9
1,632,298	+		GFF4681	0.82	+0.7
1,632,298	+		GFF4681	0.82	-0.3
1,632,298	+		GFF4681	0.82	-0.7
1,632,298	+		GFF4681	0.82	-0.9
1,632,299	-		GFF4681	0.82	-0.3
1,632,299	-		GFF4681	0.82	-0.6
1,632,299	-		GFF4681	0.82	-0.6
1,632,299	-		GFF4681	0.82	-0.4
1,632,299	-		GFF4681	0.82	-0.7
1,632,299	-		GFF4681	0.82	+0.4
1,632,299	-		GFF4681	0.82	+0.4
1,632,299	-		GFF4681	0.82	+0.5
1,632,299	-		GFF4681	0.82	+0.1
1,632,473	-				-1.9