Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4652

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,603,145	+		GFF4651	0.78	+0.1
1,603,163	+		GFF4651	0.79	+0.5
1,603,163	+		GFF4651	0.79	-0.5
1,603,163	+		GFF4651	0.79	+0.9
1,603,442	+				+0.1
1,603,442	+				-0.7
1,603,538	-				+0.7
1,603,598	+				+1.7
1,603,598	+				+1.1
1,603,903	+		GFF4652	0.39	-0.1
1,604,107	+		GFF4652	0.63	+0.1
1,604,107	+		GFF4652	0.63	+0.1
1,604,108	-		GFF4652	0.64	+0.4
1,604,108	-		GFF4652	0.64	+0.7
1,604,212	+		GFF4652	0.76	+0.8
1,604,212	+		GFF4652	0.76	+1.0
1,604,212	+		GFF4652	0.76	+0.4
1,604,212	+		GFF4652	0.76	+0.1
1,604,213	-		GFF4652	0.76	+0.1
1,604,213	-		GFF4652	0.76	-0.1
1,604,422	-				+0.4
1,604,476	+				-0.5
1,604,476	+				+0.5
1,604,819	-		GFF4653	0.43	+0.0
1,605,028	+		GFF4653	0.67	+0.1
1,605,028	+		GFF4653	0.67	-0.3
1,605,029	-		GFF4653	0.67	-0.3
1,605,127	+		GFF4653	0.77	+0.1
1,605,128	-		GFF4653	0.78	-0.4
1,605,217	+		GFF4653	0.87	-0.7
1,605,218	-		GFF4653	0.88	-0.1
1,605,370	+				-0.2
1,605,371	-				-0.3