Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4464

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,390,414	-		GFF4462	0.82	+0.7
1,390,775	+		GFF4463	0.30	-0.2
1,390,776	-		GFF4463	0.31	-0.2
1,390,776	-		GFF4463	0.31	-0.7
1,390,776	-		GFF4463	0.31	+0.3
1,391,023	+		GFF4463	0.80	-0.6
1,391,151	+				-0.2
1,391,151	+				-1.3
1,391,152	-				-0.1
1,391,152	-				-0.6
1,391,152	-				+0.2
1,391,311	+		GFF4464	0.12	-0.4
1,391,842	+		GFF4464	0.82	+1.0
1,391,842	+		GFF4464	0.82	+0.6
1,392,320	+		GFF4465	0.20	+0.3
1,392,399	+		GFF4465	0.25	-0.3
1,392,399	+		GFF4465	0.25	+0.5
1,392,634	-		GFF4465	0.39	-0.2
1,392,945	+		GFF4465	0.57	+0.3