Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4440

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,369,519	-				-0.0
1,369,557	+				+0.8
1,369,557	+				+1.0
1,370,292	+				-0.2
1,370,520	+		GFF4440	0.15	-0.2
1,370,521	-		GFF4440	0.15	-2.5
1,370,941	-		GFF4440	0.46	+0.8
1,371,744	-				+0.1
1,371,897	-		GFF4441	0.30	+0.1
1,371,956	+		GFF4441	0.38	-0.2
1,371,957	-		GFF4441	0.38	-0.2
1,372,070	+		GFF4441	0.54	+1.1
1,372,071	-		GFF4441	0.55	-0.7
1,372,332	-				+1.1