Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4417

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,348,353	+				-0.6
1,348,354	-				-0.4
1,348,796	+		GFF4416	0.42	+0.2
1,348,796	+		GFF4416	0.42	+0.3
1,349,096	-		GFF4416	0.82	-0.1
1,349,214	-				+0.2
1,349,246	-				+0.7
1,349,246	-				-0.1
1,349,307	-				-0.3
1,349,823	-		GFF4417	0.74	+0.4
1,350,037	-				-0.7
1,350,272	-		GFF4418	0.27	-0.1
1,350,404	-		GFF4418	0.41	-0.1
1,350,785	-		GFF4418	0.82	-0.5
1,350,785	-		GFF4418	0.82	+0.5