Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4163

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,077,805	+		GFF4162	0.27	-0.1
1,077,806	-		GFF4162	0.27	-0.8
1,077,887	-		GFF4162	0.37	+1.2
1,077,900	+		GFF4162	0.38	+1.0
1,077,945	+		GFF4162	0.43	-0.7
1,077,946	-		GFF4162	0.44	-0.0
1,077,946	-		GFF4162	0.44	-0.7
1,078,119	+		GFF4162	0.63	-0.1
1,078,119	+		GFF4162	0.63	-0.4
1,078,119	+		GFF4162	0.63	+0.6
1,078,203	+		GFF4162	0.73	-0.6
1,078,203	+		GFF4162	0.73	+0.2
1,078,204	-		GFF4162	0.73	+0.1
1,078,312	-		GFF4162	0.86	+1.3
1,078,468	-				-1.0
1,078,501	-				+0.4
1,078,501	-				+0.3
1,078,501	-				+0.1
1,078,507	-				+1.3
1,078,515	-				-1.1
1,078,571	-				+0.1
1,078,575	+				-1.9
1,078,576	-				+0.0
1,078,579	+				+0.2
1,078,579	+				-0.6
1,078,580	-				+0.2
1,078,580	-				-0.0
1,078,580	-				-0.2
1,078,584	-				+0.7
1,078,594	-				-0.7
1,079,017	+		GFF4163	0.57	+0.4
1,079,531	-		GFF4164	0.76	-0.8
1,079,659	-				-0.0
1,079,709	-				-0.0
1,079,733	-				-0.1
1,080,089	+		GFF4165	0.89	+0.0
1,080,089	+		GFF4165	0.89	+1.2
1,080,090	-		GFF4165	0.89	+1.2
1,080,277	+		GFF4166	0.24	-0.4