Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF4103

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,012,529	+		GFF4102	0.20	-0.3
1,012,529	+		GFF4102	0.20	+0.7
1,012,529	+		GFF4102	0.20	+1.3
1,012,530	-		GFF4102	0.20	-0.2
1,012,530	-		GFF4102	0.20	-0.2
1,012,530	-		GFF4102	0.20	+0.5
1,012,530	-		GFF4102	0.20	-0.0
1,012,530	-		GFF4102	0.20	+0.0
1,012,920	-		GFF4102	0.51	-0.0
1,013,327	+		GFF4102	0.84	-0.1
1,013,327	+		GFF4102	0.84	-1.0
1,013,327	+		GFF4102	0.84	-0.0
1,013,526	+				-0.5
1,013,772	+		GFF4103	0.24	-0.2
1,013,772	+		GFF4103	0.24	-0.2
1,013,773	-		GFF4103	0.24	-0.3
1,013,773	-		GFF4103	0.24	+0.4
1,013,890	-		GFF4103	0.36	-0.2
1,013,904	+		GFF4103	0.37	-0.2
1,013,904	+		GFF4103	0.37	+0.8
1,013,905	-		GFF4103	0.37	-0.6
1,013,905	-		GFF4103	0.37	-0.3
1,013,905	-		GFF4103	0.37	+0.2
1,013,907	+		GFF4103	0.37	+0.4
1,013,907	+		GFF4103	0.37	-1.5
1,013,907	+		GFF4103	0.37	-0.3
1,013,907	+		GFF4103	0.37	-1.0
1,013,907	+		GFF4103	0.37	-0.2
1,013,907	+		GFF4103	0.37	+0.7
1,013,907	+		GFF4103	0.37	-0.2
1,013,907	+		GFF4103	0.37	-0.3
1,013,907	+		GFF4103	0.37	+1.1
1,013,907	+		GFF4103	0.37	+0.9
1,013,908	-		GFF4103	0.37	+0.2
1,013,908	-		GFF4103	0.37	-0.8
1,013,908	-		GFF4103	0.37	-0.5
1,013,908	-		GFF4103	0.37	-0.2
1,013,908	-		GFF4103	0.37	+0.7
1,013,908	-		GFF4103	0.37	+0.0
1,013,908	-		GFF4103	0.37	+0.1
1,013,908	-		GFF4103	0.37	+0.3
1,013,964	+		GFF4103	0.43	-0.1
1,013,964	+		GFF4103	0.43	-0.9
1,013,964	+		GFF4103	0.43	-0.7
1,013,965	-		GFF4103	0.43	+0.2
1,014,003	+		GFF4103	0.47	-0.3
1,014,003	+		GFF4103	0.47	+0.4
1,014,003	+		GFF4103	0.47	-0.4
1,014,004	-		GFF4103	0.47	-0.2
1,014,174	+		GFF4103	0.63	-0.7
1,014,174	+		GFF4103	0.63	-0.3
1,014,175	-		GFF4103	0.64	-0.6
1,014,198	+		GFF4103	0.66	+0.8
1,014,199	-		GFF4103	0.66	-0.1
1,014,213	+		GFF4103	0.67	-1.2
1,014,213	+		GFF4103	0.67	+0.2
1,014,214	-		GFF4103	0.67	-0.2
1,014,243	+		GFF4103	0.70	-0.1
1,014,243	+		GFF4103	0.70	-0.4
1,014,243	+		GFF4103	0.70	+0.3
1,014,244	-		GFF4103	0.70	-1.1
1,014,244	-		GFF4103	0.70	-0.0
1,014,244	-		GFF4103	0.70	-0.9
1,014,244	-		GFF4103	0.70	+0.5
1,014,244	-		GFF4103	0.70	+0.3
1,014,354	+		GFF4103	0.81	-0.5
1,014,968	+		GFF4104	0.34	-0.1
1,015,115	+		GFF4104	0.48	+0.4
1,015,115	+		GFF4104	0.48	-0.0
1,015,116	-		GFF4104	0.48	-0.5
1,015,116	-		GFF4104	0.48	-0.1
1,015,116	-		GFF4104	0.48	+0.4
1,015,116	-		GFF4104	0.48	+0.8