Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3978

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
893,529	-		GFF3977	0.59	-0.4
893,529	-		GFF3977	0.59	-0.5
893,529	-		GFF3977	0.59	+0.1
893,978	+				+0.4
893,979	-				+0.1
894,005	+				+1.0
894,005	+				-0.6
894,005	+				+0.7
894,006	-				+0.1
894,010	-				-0.0
894,139	+				-1.6
894,140	-				+0.7
894,181	+		GFF3978	0.13	-0.0
894,181	+		GFF3978	0.13	+1.3
895,657	+		GFF3980	0.23	-0.3