Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3602

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
490,412	+		GFF3601	0.48	+0.1
490,412	+		GFF3601	0.48	+0.2
490,412	+		GFF3601	0.48	-0.1
490,413	-		GFF3601	0.48	+1.1
490,529	+		GFF3601	0.61	+0.8
490,529	+		GFF3601	0.61	-0.4
490,530	-		GFF3601	0.61	-0.0
490,763	-		GFF3601	0.87	-0.9
490,864	-				+0.1
490,864	-				-0.7
490,864	-				-0.1
490,864	-				-0.4
490,907	+				+0.6
490,908	-				+0.3
490,983	+				+0.1
490,983	+				-0.0
491,025	+				+0.0
491,026	-				+0.0
491,102	-		GFF3602	0.14	-0.5
491,650	-		GFF3603	0.11	-0.8
491,956	-		GFF3603	0.68	-0.4
492,202	+				-0.0