Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3236

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
117,452	+		GFF3234	0.77	+1.6
117,452	+		GFF3234	0.77	-0.2
117,453	-		GFF3234	0.77	+0.3
117,506	+		GFF3234	0.85	+1.0
117,506	+		GFF3234	0.85	-0.2
117,896	-		GFF3235	0.39	+0.7
117,896	-		GFF3235	0.39	+0.1
117,940	+		GFF3235	0.46	+0.2
118,199	-		GFF3235	0.82	+0.3
118,199	-		GFF3235	0.82	-0.5
118,199	-		GFF3235	0.82	-1.0
118,581	+		GFF3236	0.24	-1.3
119,020	+		GFF3236	0.76	+0.0
119,336	+		GFF3237	0.51	+0.3
119,359	-		GFF3237	0.63	+0.3
119,396	+		GFF3237	0.81	+0.1
119,473	+				-0.4
119,474	-				+1.3
119,475	+				+0.7
119,499	+				-1.4
119,499	+				+1.3
119,548	-				+0.0
119,663	+		GFF3238	0.30	-0.2
119,683	+		GFF3238	0.36	-0.0
119,684	-		GFF3238	0.36	+0.3
120,005	-				-0.1
120,005	-				+0.2
120,133	+		GFF3239	0.18	-0.3
120,133	+		GFF3239	0.18	-0.0
120,217	+		GFF3239	0.27	-0.1
120,218	+		GFF3239	0.27	+0.0