Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3171

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
47,461	-		GFF3170	0.35	-0.7
47,722	+		GFF3170	0.78	-0.3
47,967	-				-0.0
48,085	-				+0.3
48,169	+				-0.5
48,332	+				+0.0
48,496	+		GFF3171	0.20	+0.1
48,504	+		GFF3171	0.21	+0.3
48,684	+		GFF3171	0.44	-0.2
48,684	+		GFF3171	0.44	+1.5
48,688	+		GFF3171	0.45	+1.0
48,689	-		GFF3171	0.45	+0.9
49,156	+				-0.0
49,156	+				+0.2
49,156	+				-0.3
49,157	-				-0.3
49,157	-				+2.0
49,157	-				+0.4
49,157	-				+2.0
49,157	-				-0.2
49,164	+				-0.5
49,764	-				-0.4
50,005	+				+0.2