Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF3165

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
41,680	+				-0.2
41,680	+				+0.2
41,782	+				+1.6
41,782	+				-1.1
41,786	+				-0.2
41,786	+				-0.7
41,787	-				-0.2
42,472	-				+0.2
42,554	+				+0.6
42,702	-		GFF3165	0.14	-0.1
43,143	-		GFF3165	0.56	+0.4
43,409	+		GFF3165	0.82	+0.2
43,470	-		GFF3165	0.87	+0.0
43,615	-				+0.3
44,091	+		GFF3166	0.20	+0.5
44,092	-		GFF3166	0.20	+0.0
44,422	+		GFF3166	0.53	+0.0