Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2867

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
455,210	+		GFF2866	0.68	+0.5
455,210	+		GFF2866	0.68	+0.7
455,211	-		GFF2866	0.68	+0.2
455,421	-		GFF2866	0.82	-0.2
455,421	-		GFF2866	0.82	+0.6
455,424	-		GFF2866	0.82	-0.1
455,424	-		GFF2866	0.82	+0.1
455,505	-		GFF2866	0.87	-1.3
455,505	-		GFF2866	0.87	-0.0
455,801	-		GFF2867	0.26	+0.9
455,801	-		GFF2867	0.26	+0.3
456,285	+				+0.3
456,836	+		GFF2868	0.57	+1.4
456,837	-		GFF2868	0.58	-1.5
456,837	-		GFF2868	0.58	-0.3