Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2404

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
49,738	+		GFF2403	0.57	+0.4
49,739	-		GFF2403	0.57	-0.4
50,529	+				-0.6
50,575	-				+0.8
50,575	-				+0.1
50,688	-		GFF2404	0.15	+1.2
50,916	+		GFF2404	0.38	+0.8
50,917	-		GFF2404	0.38	-0.2
51,012	+		GFF2404	0.48	+0.4
51,013	-		GFF2404	0.48	-0.6
51,285	+		GFF2404	0.76	-0.0
51,285	+		GFF2404	0.76	+0.2
51,730	+		GFF2405	0.17	-0.7
51,730	+		GFF2405	0.17	-1.0
51,731	-		GFF2405	0.17	-0.1
51,731	-		GFF2405	0.17	-1.4
51,733	+		GFF2405	0.17	-0.7
52,253	-		GFF2405	0.65	+0.0