Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF2283

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
1,168,031	-		GFF2282	0.25	-0.4
1,168,031	-		GFF2282	0.25	-0.5
1,168,204	+		GFF2282	0.42	+0.1
1,168,204	+		GFF2282	0.42	+0.1
1,168,204	+		GFF2282	0.42	-0.1
1,168,205	-		GFF2282	0.42	-1.4
1,168,205	-		GFF2282	0.42	-0.0
1,168,291	+		GFF2282	0.51	+0.1
1,168,292	-		GFF2282	0.51	-0.5
1,168,292	-		GFF2282	0.51	+0.9
1,168,292	-		GFF2282	0.51	+0.5
1,168,442	-		GFF2282	0.66	-0.6
1,168,442	-		GFF2282	0.66	-0.4
1,168,442	-		GFF2282	0.66	-0.0
1,168,467	-		GFF2282	0.68	-0.0
1,168,489	+		GFF2282	0.71	+0.2
1,168,956	-		GFF2283	0.16	-1.1
1,168,956	-		GFF2283	0.16	-0.9
1,168,956	-		GFF2283	0.16	-0.3
1,168,958	+		GFF2283	0.16	+0.1
1,168,959	-		GFF2283	0.17	+0.5
1,168,959	-		GFF2283	0.17	-0.4
1,169,060	+		GFF2283	0.29	-0.3
1,169,061	-		GFF2283	0.30	-0.4
1,169,061	-		GFF2283	0.30	-2.1
1,169,061	-		GFF2283	0.30	-2.0
1,169,061	-		GFF2283	0.30	-0.4
1,169,102	+		GFF2283	0.35	+0.4
1,169,102	+		GFF2283	0.35	-0.1
1,169,102	+		GFF2283	0.35	+0.2
1,169,144	+		GFF2283	0.40	-0.0
1,169,213	+		GFF2283	0.49	-0.0
1,169,213	+		GFF2283	0.49	+0.1
1,169,214	-		GFF2283	0.49	-0.2
1,169,214	-		GFF2283	0.49	-0.6
1,169,387	+		GFF2283	0.71	+0.4
1,169,387	+		GFF2283	0.71	+0.9
1,169,387	+		GFF2283	0.71	-0.2
1,169,388	-		GFF2283	0.71	-0.8
1,169,388	-		GFF2283	0.71	-0.4
1,169,534	+		GFF2283	0.89	+0.9
1,169,534	+		GFF2283	0.89	-0.1
1,169,534	+		GFF2283	0.89	+0.4
1,169,759	-		GFF2284	0.19	-0.4
1,169,785	+		GFF2284	0.23	-0.4
1,169,785	+		GFF2284	0.23	+0.0
1,169,785	+		GFF2284	0.23	+0.8
1,169,785	+		GFF2284	0.23	+0.1
1,169,785	+		GFF2284	0.23	-0.6
1,169,786	-		GFF2284	0.23	-0.9
1,169,786	-		GFF2284	0.23	+1.1
1,169,786	-		GFF2284	0.23	-0.6
1,169,893	+		GFF2284	0.39	-1.2
1,169,893	+		GFF2284	0.39	+1.1
1,169,893	+		GFF2284	0.39	+1.7
1,169,894	-		GFF2284	0.39	-0.0
1,169,894	-		GFF2284	0.39	-1.3
1,170,076	+		GFF2284	0.66	-0.1
1,170,155	-		GFF2284	0.78	-0.2
1,170,260	-				+0.0
1,170,359	+				+0.3
1,170,359	+				-0.1
1,170,359	+				+0.5
1,170,359	+				-0.2
1,170,360	-				+0.4
1,170,360	-				+0.9
1,170,360	-				+0.1
1,170,360	-				-0.3
1,170,360	-				-0.1
1,170,360	-				-0.0
1,170,360	-				+0.7
1,170,368	+				+0.1
1,170,368	+				+0.3
1,170,368	+				-0.9
1,170,368	+				+1.2
1,170,369	-				-0.2
1,170,491	-				-1.7
1,170,510	-				+1.1
1,170,510	-				-0.0
1,170,580	-				-0.1