Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF131
Experiment: Ying_Others16 rep C; time point 2
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Ying_Others16 rep C; time point 2 |
---|---|---|---|---|---|
remove | |||||
146,841 | - | GFF131 | 0.18 | +0.5 | |
146,930 | + | GFF131 | 0.36 | +0.6 | |
147,122 | + | GFF131 | 0.73 | +0.0 | |
147,423 | + | GFF132 | 0.15 | -0.7 | |
147,423 | + | GFF132 | 0.15 | +1.0 | |
147,654 | + | GFF132 | 0.32 | +1.0 | |
147,739 | - | GFF132 | 0.39 | -0.0 | |
147,816 | + | GFF132 | 0.45 | -0.4 | |
147,816 | + | GFF132 | 0.45 | -0.4 | |
148,122 | + | GFF132 | 0.68 | +0.4 | |
148,123 | - | GFF132 | 0.68 | +0.1 | |
148,134 | + | GFF132 | 0.69 | -0.7 | |
148,204 | - | GFF132 | 0.74 | +0.9 | |
148,234 | - | GFF132 | 0.76 | +0.1 |
Or see this region's nucleotide sequence