Strain Fitness in Hydrogenophaga sp. GW460-11-11-14-LB1 around GFF109

Experiment: Ying_Others16 rep C; time point 2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ying_Others16 rep C; time point 2
117,925	+		GFF109	0.47	-0.7
117,925	+		GFF109	0.47	-1.0
117,925	+		GFF109	0.47	+0.6
117,925	+		GFF109	0.47	-0.4
117,926	-		GFF109	0.47	-0.5
117,926	-		GFF109	0.47	-0.5
117,926	-		GFF109	0.47	-0.7
117,926	-		GFF109	0.47	+0.1
118,081	+		GFF109	0.70	+0.9
118,081	+		GFF109	0.70	-1.1
118,082	-		GFF109	0.70	-0.5
118,082	-		GFF109	0.70	-0.1
118,178	-		GFF109	0.85	-0.1
118,192	+		GFF109	0.87	-1.2
118,305	+				-0.6
118,691	+		GFF110	0.54	-0.2
118,691	+		GFF110	0.54	-0.2
118,692	-		GFF110	0.55	+0.8
118,692	-		GFF110	0.55	-0.1
118,724	+		GFF110	0.60	-0.4
118,725	-		GFF110	0.60	+1.3
118,748	+		GFF110	0.63	-0.1
118,748	+		GFF110	0.63	+0.1
118,868	+		GFF110	0.82	+0.0
118,868	+		GFF110	0.82	-0.8
118,868	+		GFF110	0.82	-0.2
118,869	-		GFF110	0.82	-0.6
118,869	-		GFF110	0.82	-0.7
118,970	+				+0.2
118,970	+				+0.0
118,970	+				+1.1
118,970	+				+0.5
119,160	+				+0.9
119,160	+				-1.0
119,161	-				+0.0
119,161	-				-0.7
119,271	+				+0.1
119,271	+				-0.1
119,271	+				-0.0
119,272	-				+1.2